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C7NNN9 (C7NNN9_HALUD) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Deoxyribose-phosphate aldolase HAMAP MF_00114
Short name=DERA HAMAP MF_00114
EC=4.1.2.4 HAMAP MF_00114
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolase HAMAP MF_00114
Phosphodeoxyriboaldolase HAMAP MF_00114
Gene names
Name:deoC HAMAP MF_00114
Ordered Locus Names:Huta_1388
OrganismHalorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) [Complete proteome] [HAMAP]
Taxonomic identifier519442 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halorhabdus

Protein attributes

Sequence length213 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. HAMAP MF_00114

Catalytic activity

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. HAMAP MF_00114

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. HAMAP MF_00114

Subcellular location

Cytoplasm By similarity HAMAP MF_00114.

Sequence similarities

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. HAMAP MF_00114

Ontologies

Keywords
   Cellular componentCytoplasm HAMAP MF_00114
   LigandSchiff base HAMAP MF_00114
   Molecular functionLyase HAMAP MF_00114 EMBL ACV11564.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate catabolic process

Inferred from electronic annotation. Source: HAMAP

deoxyribonucleotide catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiondeoxyribose-phosphate aldolase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1481Schiff-base intermediate with acetaldehyde By similarity HAMAP MF_00114
Active site1731 By similarity HAMAP MF_00114

Sequences

Sequence LengthMass (Da)Tools
C7NNN9 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: A3B1D68C7AB885EF

FASTA21322,125
        10         20         30         40         50         60 
MDDILSRIEH TVLGPETTPA DVEAVLDDAS EYGLRACIPP CYLELAGEYA PDVEVATVIG 

        70         80         90        100        110        120 
FPHGNHTTAA KVAEAEDAVE AGADELDMVC NVGLLKAGED DAVREDIESV VAATRKPVKV 

       130        140        150        160        170        180 
IIETPLLTDE EKHRASQLVA DAGADFVKTA TGFGGGGATV PDVELMSEYA PVKASGGVGS 

       190        200        210 
WADAKAMFDA GADRIGASSG DVIAEEYFEA QEA

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001687 Genomic DNA. Translation: ACV11564.1.
RefSeqYP_003130297.1. NC_013158.1.

3D structure databases

ProteinModelPortalC7NNN9.
ModBaseSearch...

Protein-protein interaction databases

STRINGC7NNN9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8383667.
GenomeReviewsGene locus Huta_1388 in contig CP001687_GR.
KEGGhut:Huta_1388.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAIDHTNLK.
ProtClustDBCLSK511544.

Family and domain databases

HAMAPMF_00114. DeoC_type1.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
IPR022979. Deoxyribose_phosphate_aldo_1.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01619.
PANTHERPTHR10889. DeoC. 1 hit.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
TIGRFAMsTIGR00126. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7NNN9_HALUD
AccessionPrimary (citable) accession number: C7NNN9
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: November 16, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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