C7NML7 (C7NML7_HALUD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
L-arabinose isomerase EMBL ACV11330.1
EC=5.3.1.4 EMBL ACV11330.1

Gene names

Ordered Locus Names:

Huta_1154

Organism

Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) [Complete proteome] [HAMAP]

Taxonomic identifier

519442 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Halorhabdus

Protein attributes

Sequence length	495 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Isomerase EMBL ACV11330.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	fucose metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	L-arabinose isomerase activity Inferred from electronic annotation. Source: EC L-fucose isomerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7NML7 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 1D9083E7E2AC0CE0	FASTA	495	54,543
	10 20 30 40 50 60 MSPIPHGTDF DDLEVWFLTG SQHLYGEETL DLVAEDAREV AAGLDDDDRI PVSVEFKSVL 70 80 90 100 110 120 TTADAIESVV REANASEDCI GLITWMHTFS PAKMWIRGLQ ALDVPFVHLH TQFNRELPYD 130 140 150 160 170 180 EIDMDFMNAN QSAHGGREFG HIVSRLDIDR KVVVGHWEDD DVREQLDTWA RAAAARHELR 190 200 210 220 230 240 GAKIARFGDN MRDVAVTEGD KVSAQMAFGA SVDGYGLGDL VEFVEDVTES EIDDLLEEYD 250 260 270 280 290 300 QQYELAAELQ ADGDRRDSLR EAARIELGIR AFLEDGEFVG FTTTFENLTG LSQLPGLAVQ 310 320 330 340 350 360 RLMADGYGFG PEGDWKSALL TRAMKVMGQG LNGGTSLMEH YTYDLTEGDE KVLGAHMLEI 370 380 390 400 410 420 CESIAGEQPR LEIHPLDIGG KADPVRAVFD ADTGPAINAS LVDMGDRFRL ITNDVESVGP 430 440 450 460 470 480 DEPLPELPVA RAVWKPEPDF ETAIEAWIKA GGAHHTGYSQ AVTNEHLEDF ASMTGIEHLH 490 VGADTDIADV ERKLS

References

[1]

"Complete genome sequence of Halorhabdus utahensis type strain (AX-2)." Anderson I., Tindall B.J., Pomrenke H., Goker M., Lapidus A., Nolan M., Copeland A., Glavina Del Rio T., Chen F., Tice H., Cheng J.F., Lucas S., Chertkov O., Bruce D., Brettin T., Detter J.C., Han C., Goodwin L. , Land M., Hauser L., Chang Y.J., Jeffries C.D., Pitluck S., Pati A., Mavromatis K., Ivanova N., Ovchinnikova G., Chen A., Palaniappan K., Chain P., Rohde M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 1:218-225(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12940 / JCM 11049 / AX-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001687 Genomic DNA. Translation: ACV11330.1.
RefSeq	YP_003130063.1. NC_013158.1.
3D structure databases
ProteinModelPortal	C7NML7.
ModBase	Search...
Protein-protein interaction databases
STRING	C7NML7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8383429.
GenomeReviews	Gene locus Huta_1154 in contig CP001687_GR.
KEGG	hut:Huta_1154.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	EVCPTIA.
ProtClustDB	PRK02929.
Family and domain databases
HAMAP	MF_00519. Arabinose_Isome. [Tree]
InterPro	IPR024664. Ara_Isoase_C. IPR004216. Fuc/Ara_isomerase_C. IPR009015. Fucose_isomerase_N/cen. IPR003762. Lara_isomerase. [Graphical view]
KO	K01804.
Pfam	PF11762. Arabinose_Iso_C. 1 hit. PF02610. Arabinose_Isome. 1 hit. [Graphical view]
PIRSF	PIRSF001478. L-ara_isomerase. 1 hit.
ProDom	PD018364. Lara_isomerase. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF50443. Fuc_isomerase_C. 1 hit. SSF53743. Fuc_isomerase_N. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7NML7_HALUD

Accession

Primary (citable) accession number: C7NML7

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)