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C7NKD9 (C7NKD9_KYTSD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length878 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACV06977.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C7NKD9 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 1598F2222185E9DE

FASTA87894,745
        10         20         30         40         50         60 
MARSERRTVR VGERTLSVSS LDKVLYPEAG TTKADVVHYY LSVAEVLLPQ LAGRPVTRKR 

        70         80         90        100        110        120 
WVDGVGTEGD PGEVFFRKDL EDSAPDWIPT GRIVHANRAN SYPLATEAAV LAWFAQVAAL 

       130        140        150        160        170        180 
ELHTPQWRFG PDGQPRRPDR LVLDLDPGEG VGLTECAQVA RWCREVLDGM ALEAFPVTSG 

       190        200        210        220        230        240 
SKGIHLYAAL DGTHDAEAVS AVAHELARAL EADHPDLVVS TMKRARRAGK VFLDWSQNNA 

       250        260        270        280        290        300 
SKTTVAPYSL RGRARPTVAA PRTWEELDDP GLAQLELDEV LDRVADGIDP VASLGAGTGP 

       310        320        330        340        350        360 
GGAGEVSSPA PDRLRTYRSM RDPDRTAEPV PADPPREREA PDGELPSFVI QEHHASSLHW 

       370        380        390        400        410        420 
DFRLEHSGVL VSWAVPKGPP LEHDTNRLAV MTEDHPLEYG TFEGTIAAGE YGAGEVTIWD 

       430        440        450        460        470        480 
AGTYERKKWR EGKEVIAVLH GRPDGGLGGV PRRFALIQAT GMGSERNWLL RLTDEQPGAG 

       490        500        510        520        530        540 
HPQDGSPEEV TAAPSPSRSR ADRSDSRTAR RALRRRPAPG FTVADLPAAM AATAGTPEQV 

       550        560        570        580        590        600 
ERAVAGGQEW AFEMKWDGYR VVAGVRTAGQ GPADADADAD AGAEREGAVV LASRNGKDLT 

       610        620        630        640        650        660 
DTFPAAVELT RLLRGEAAER GGAVLDGELV ALDDRGRPDF GLLQAALGDG PGVNAAGDPI 

       670        680        690        700        710        720 
ELRYLVFDLL QLGAPGDPED RQRSLLRIPW GERRELLREV LGTGGDAVSV PPAHTGTLAQ 

       730        740        750        760        770        780 
AQRASRGLGL EGVVAKRVDA VYLPGQRGSA WVKLKTQRHQ EVVVIGVRQG RGGRSGGIGS 

       790        800        810        820        830        840 
LLVAVGDDEG ELRYAGRVGT GFSAAQLADI EKTLRRIERK TPPVDDVPAA DRTDAWWVTP 

       850        860        870 
RLVGEVSLAG RTRDQRVRQA VWRGWRPDKE AGEVRWEV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001686 Genomic DNA. Translation: ACV06977.1.
RefSeqYP_003149742.1. NC_013169.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING478801.Ksed_19790.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV06977; ACV06977; Ksed_19790.
GeneID8373483.
KEGGkse:Ksed_19790.
PATRIC22193619. VBIKytSed14067_1909.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.
ProtClustDBPRK09632.

Enzyme and pathway databases

BioCycKSED478801:GI4L-1970-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7NKD9_KYTSD
AccessionPrimary (citable) accession number: C7NKD9
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)