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C7NKD9

- C7NKD9_KYTSD

UniProt

C7NKD9 - C7NKD9_KYTSD

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Protein
Submitted name: DNA ligase D/DNA polymerase LigD
Gene
Ksed_19790
Organism
Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) (Micrococcus sedentarius)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciKSED478801:GI4L-1970-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D/DNA polymerase LigDImported
Gene namesi
Ordered Locus Names:Ksed_19790Imported
OrganismiKytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) (Micrococcus sedentarius)Imported
Taxonomic identifieri478801 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeDermacoccaceaeKytococcus
ProteomesiUP000006666: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi478801.Ksed_19790.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7NKD9-1 [UniParc]FASTAAdd to Basket

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MARSERRTVR VGERTLSVSS LDKVLYPEAG TTKADVVHYY LSVAEVLLPQ    50
LAGRPVTRKR WVDGVGTEGD PGEVFFRKDL EDSAPDWIPT GRIVHANRAN 100
SYPLATEAAV LAWFAQVAAL ELHTPQWRFG PDGQPRRPDR LVLDLDPGEG 150
VGLTECAQVA RWCREVLDGM ALEAFPVTSG SKGIHLYAAL DGTHDAEAVS 200
AVAHELARAL EADHPDLVVS TMKRARRAGK VFLDWSQNNA SKTTVAPYSL 250
RGRARPTVAA PRTWEELDDP GLAQLELDEV LDRVADGIDP VASLGAGTGP 300
GGAGEVSSPA PDRLRTYRSM RDPDRTAEPV PADPPREREA PDGELPSFVI 350
QEHHASSLHW DFRLEHSGVL VSWAVPKGPP LEHDTNRLAV MTEDHPLEYG 400
TFEGTIAAGE YGAGEVTIWD AGTYERKKWR EGKEVIAVLH GRPDGGLGGV 450
PRRFALIQAT GMGSERNWLL RLTDEQPGAG HPQDGSPEEV TAAPSPSRSR 500
ADRSDSRTAR RALRRRPAPG FTVADLPAAM AATAGTPEQV ERAVAGGQEW 550
AFEMKWDGYR VVAGVRTAGQ GPADADADAD AGAEREGAVV LASRNGKDLT 600
DTFPAAVELT RLLRGEAAER GGAVLDGELV ALDDRGRPDF GLLQAALGDG 650
PGVNAAGDPI ELRYLVFDLL QLGAPGDPED RQRSLLRIPW GERRELLREV 700
LGTGGDAVSV PPAHTGTLAQ AQRASRGLGL EGVVAKRVDA VYLPGQRGSA 750
WVKLKTQRHQ EVVVIGVRQG RGGRSGGIGS LLVAVGDDEG ELRYAGRVGT 800
GFSAAQLADI EKTLRRIERK TPPVDDVPAA DRTDAWWVTP RLVGEVSLAG 850
RTRDQRVRQA VWRGWRPDKE AGEVRWEV 878
Length:878
Mass (Da):94,745
Last modified:October 13, 2009 - v1
Checksum:i1598F2222185E9DE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001686 Genomic DNA. Translation: ACV06977.1.
RefSeqiYP_003149742.1. NC_013169.1.

Genome annotation databases

EnsemblBacteriaiACV06977; ACV06977; Ksed_19790.
GeneIDi8373483.
KEGGikse:Ksed_19790.
PATRICi22193619. VBIKytSed14067_1909.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001686 Genomic DNA. Translation: ACV06977.1 .
RefSeqi YP_003149742.1. NC_013169.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 478801.Ksed_19790.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACV06977 ; ACV06977 ; Ksed_19790 .
GeneIDi 8373483.
KEGGi kse:Ksed_19790.
PATRICi 22193619. VBIKytSed14067_1909.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci KSED478801:GI4L-1970-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14392 / DSM 20547 / CCM 314 / 541.

Entry informationi

Entry nameiC7NKD9_KYTSD
AccessioniPrimary (citable) accession number: C7NKD9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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