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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Lebu_2051

Organism
Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei232 – 2321NucleophileUniRule annotation
Active sitei262 – 2621Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciLBUC523794:GHCR-2091-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Lebu_2051Imported
OrganismiLeptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249)Imported
Taxonomic identifieri523794 [NCBI]
Taxonomic lineageiBacteriaFusobacteriaFusobacterialesLeptotrichiaceaeLeptotrichia
ProteomesiUP000001910 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi523794.Lebu_2051.

Structurei

3D structure databases

ProteinModelPortaliC7ND34.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C7ND34-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENGVMIQYF EWNLPSDGKH WKRLKDDAKH LSEIGVSGVW IPPAYKGTSE
60 70 80 90 100
NDVGYGAYDL WDLGEFDQKG TVRTKYGTKQ ELIEAIEELH KYNINVYLDA
110 120 130 140 150
VLNHKGGADE TEKFLAIEVD PEDRTVEISE PFEIEGWTKF TFPGRNNKYS
160 170 180 190 200
SFKWNHNLFD GVDYDNKTGK TAIYKIVGEN KDWDEGVDSE LGNYDYLMNA
210 220 230 240 250
DIDFSHPEVR EEVIRWGKWV VNELKIDGFR MDAVKHIKDE FIAEFLTQVR
260 270 280 290 300
ATHGEKFYSV GEYWRNDLEK LKEYLDNVGY KTDLFDVGLH FNMYDASKKK
310 320 330 340 350
QDYDLREIFE HTIVATNPMA AVTFVDNHDS QKGSALESQV ENWFIPHSYA
360 370 380 390 400
IILLSKDGYP CLFYGDYYGI GGEKSPHQWI IDKLLEIRRI HAYGEQINHL
410 420 430 440 450
DDPNVIAIQR TGRDERTGCV AVLSNSEEEE EIQVEIGKEK AGEVWQEVTG
460 470 480
SEYEDVVIDE DGNANFKVEP EKISVWIRKS
Length:480
Mass (Da):55,506
Last modified:October 13, 2009 - v1
Checksum:i887CDA0EF3F56BC6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001685 Genomic DNA. Translation: ACV39912.1.
RefSeqiWP_015770247.1. NC_013192.1.
YP_003164903.1. NC_013192.1.

Genome annotation databases

EnsemblBacteriaiACV39912; ACV39912; Lebu_2051.
KEGGilba:Lebu_2051.
PATRICi22403451. VBILepBuc70646_2073.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001685 Genomic DNA. Translation: ACV39912.1.
RefSeqiWP_015770247.1. NC_013192.1.
YP_003164903.1. NC_013192.1.

3D structure databases

ProteinModelPortaliC7ND34.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi523794.Lebu_2051.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV39912; ACV39912; Lebu_2051.
KEGGilba:Lebu_2051.
PATRICi22403451. VBILepBuc70646_2073.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciLBUC523794:GHCR-2091-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249Imported.

Entry informationi

Entry nameiC7ND34_LEPBD
AccessioniPrimary (citable) accession number: C7ND34
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 27, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.