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C7NCD6 (C7NCD6_LEPBD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C7NCD6 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 3C03D9BAC10C1486

FASTA39443,225
        10         20         30         40         50         60 
MAKAKFERSK PHVNVGTIGH VDHGKTTTTA AISKVLAEKG LAEKVDFENI DQAPEERERG 

        70         80         90        100        110        120 
ITINTAHIEY ETEKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLARQVGVPY IVVYLNKVDM VDDEELLELV EMEVRELLTE YGFPGDDVPV IKGSSLGALN 

       190        200        210        220        230        240 
GEQKWIDAIV ELMDAVDEYI PTPERPVDQS FLMPIEDVFT ITGRGTVVTG RVERGVIKVG 

       250        260        270        280        290        300 
EEVEIVGIKP TTKTTVTGVE MFRKLLDSGQ AGDNIGALLR GTKKEEVERG QVLAKPGTIN 

       310        320        330        340        350        360 
PHTGFKSEVY VLTKDEGGRH TPFFTGYKPQ FYFRTTDITG EVNLPEGVEM VMPGDNIEMT 

       370        380        390 
VELIHPIAME EGLRFAIREG GRTVASGVVA TITK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001685 Genomic DNA. Translation: ACV39782.1.
RefSeqYP_003164773.1. NC_013192.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING523794.Lebu_1919.

Proteomic databases

PRIDEC7NCD6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV39782; ACV39782; Lebu_1919.
GeneID8408637.
KEGGlba:Lebu_1919.
PATRIC22403185. VBILepBuc70646_1941.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAWIDAIVE.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycLBUC523794:GHCR-1958-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7NCD6_LEPBD
AccessionPrimary (citable) accession number: C7NCD6
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: June 11, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)