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C7N5F2 (C7N5F2_SLAHD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
Gene names
Name:glyQ HAMAP MF_00254
Ordered Locus Names:Shel_11020
OrganismSlackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) (Peptococcus heliotrinreducens) [Complete proteome] [HAMAP]
Taxonomic identifier471855 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Coriobacteridae › Coriobacteriales › Coriobacterineae › Coriobacteriaceae › Slackia

Protein attributes

Sequence length310 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254 SAAS SAAS002310

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254 SAAS SAAS002310

Subcellular location

Cytoplasm By similarity HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Sequences

Sequence LengthMass (Da)Tools
C7N5F2 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: BDC6335E7104DC00

FASTA31035,286
        10         20         30         40         50         60 
MSKPANGDAL TFQEVILRLQ QYWADLGCVV LQPYDNEVGA GTFHTATTLR SLGPDTWRTA 

        70         80         90        100        110        120 
YVQPSRRPTD GRYGENPNRM QHYYQYQVLL KPSPDNVQDL YLESLRAIGI NVEEHDVRFV 

       130        140        150        160        170        180 
EDDWESPTLG AWGLGWEVWI DGMEVTQFTY FQQVGGFECS PVPAEITYGL ERLTMYIQGV 

       190        200        210        220        230        240 
DSVYDIVWSR GDDGIVFTYG DVFLENEREF SAYNFEVADT DFLFSEFDRY ERECNRTLEA 

       250        260        270        280        290        300 
GLPLPAYDYV LKCSHAFNLL DARGVISATE RMGYILRVRT IAKACCASYL EHVVGQAPAL 

       310 
EDGKEAEDGE

« Hide

References

[1]"Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1T)."
Pukall R., Lapidus A., Nolan M., Copeland A., Glavina Del Rio T., Lucas S., Chen F., Tice H., Cheng J.F., Chertkov O., Bruce D., Goodwin L., Kuske C., Brettin T., Detter J.C., Han C., Pitluck S., Pati A. expand/collapse author list , Mavromatis K., Ivanova N., Ovchinnikova G., Chen A., Palaniappan K., Schneider S., Rohde M., Chain P., D'haeseleer P., Goker M., Bristow J., Eisen J.A., Markowitz V., Kyrpides N.C., Klenk H.P., Hugenholtz P.
Stand. Genomic Sci. 1:234-241(2009)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001684 Genomic DNA. Translation: ACV22137.1.
RefSeqYP_003143486.1. NC_013165.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC7N5F2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8394993.
GenomeReviewsGene locus Shel_11020 in contig CP001684_GR.
KEGGshi:Shel_11020.
PATRIC23641789. VBISlaHel66389_1094.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMACRRPTDG.
ProtClustDBPRK09348.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7N5F2_SLAHD
AccessionPrimary (citable) accession number: C7N5F2
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 25, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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