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C7MY23 (C7MY23_SACVD) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Glycerol-3-phosphate dehydrogenase [NAD(P)+] HAMAP-Rule MF_00394

EC=1.1.1.94 HAMAP-Rule MF_00394
Alternative name(s):
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase HAMAP-Rule MF_00394
Gene names
Name:gpsA HAMAP-Rule MF_00394
Ordered Locus Names:Svir_09130 EMBL ACU95971.1
OrganismSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) [Complete proteome] [HAMAP] EMBL ACU95971.1
Taxonomic identifier471857 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharomonospora

Protein attributes

Sequence length336 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processLipid biosynthesis
Lipid metabolism
Phospholipid biosynthesis HAMAP-Rule MF_00394 RuleBase RU004280 SAAS SAAS011128
Phospholipid metabolism
   Cellular componentCytoplasm HAMAP-Rule MF_00394 SAAS SAAS011128
   LigandNAD HAMAP-Rule MF_00394 RuleBase RU000437 SAAS SAAS011128
   Molecular functionOxidoreductase HAMAP-Rule MF_00394 RuleBase RU000437 SAAS SAAS011128 EMBL ACU95971.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

glycerol-3-phosphate biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

glycerol-3-phosphate catabolic process

Inferred from electronic annotation. Source: InterPro

glycerophospholipid metabolic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

phospholipid biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentglycerol-3-phosphate dehydrogenase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionNAD binding

Inferred from electronic annotation. Source: InterPro

glycerol-3-phosphate dehydrogenase [NAD(P)+] activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

glycerol-3-phosphate dehydrogenase [NAD+] activity

Inferred from electronic annotation. Source: UniProtKB-EC

glycerol-3-phosphate dehydrogenase [NADP+] activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding10 – 156NAD By similarity HAMAP-Rule MF_00394
Region257 – 2582Substrate binding By similarity HAMAP-Rule MF_00394 PIRSR PIRSR000114-2

Sites

Active site1931Proton acceptor By similarity HAMAP-Rule MF_00394 PIRSR PIRSR000114-1
Binding site1081NAD; via amide nitrogen By similarity HAMAP-Rule MF_00394
Binding site1081Substrate By similarity HAMAP-Rule MF_00394
Binding site1421NAD; via amide nitrogen By similarity HAMAP-Rule MF_00394
Binding site2571NAD By similarity HAMAP-Rule MF_00394
Binding site2841NAD By similarity HAMAP-Rule MF_00394

Sequences

Sequence LengthMass (Da)Tools
C7MY23 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 14A3033E7C3ECACE

FASTA33635,337
        10         20         30         40         50         60 
MSVQRVTVLG AGSWGTTFAK VLADAGRDVT LWARRAEVAD EIRTQHTNSS YLPGVRLPER 

        70         80         90        100        110        120 
LTATSDAATA LEAADAVVFA VPSQKLRENL AAWRDLLPAD AILVSLAKGV ELGTLKRMSE 

       130        140        150        160        170        180 
VISDITGVEP GDVVVVSGPN LAKEIAQQQP AAAVLACADH DRAVAIQQAS FNSYFRPYTN 

       190        200        210        220        230        240 
TDVVGCELGG ACKNVIALSC GMAAGLGYGT NTMATLITRG LAEMARLGAA LGADPLTFAG 

       250        260        270        280        290        300 
LAGVGDLVAT CSSPLSRNRT FGERIGRGET MEQARAAQGG QVAEGVTSCR SIRELARRLD 

       310        320        330 
VDMPITDAMY RVCHEGVDPG TVGAELLGRR QKHEWS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001683 Genomic DNA. Translation: ACU95971.1.
RefSeqYP_003132798.1. NC_013159.1.

3D structure databases

ProteinModelPortalC7MY23.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING471857.Svir_09130.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU95971; ACU95971; Svir_09130.
GeneID8386250.
KEGGsvi:Svir_09130.
PATRIC23392214. VBISacVir111818_0903.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0240.
HOGENOMHOG000246853.
KOK00057.
OMAHLLHCGK.
OrthoDBEOG6JDWF4.

Enzyme and pathway databases

BioCycSVIR471857:GHAV-912-MONOMER.
UniPathwayUPA00940.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
HAMAPMF_00394. NAD_Glyc3P_dehydrog.
InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11728. PTHR11728. 1 hit.
PfamPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSPR00077. GPDHDRGNASE.
SUPFAMSSF48179. SSF48179. 1 hit.
PROSITEPS00957. NAD_G3PDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7MY23_SACVD
AccessionPrimary (citable) accession number: C7MY23
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)