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C7MY23

- C7MY23_SACVD

UniProt

C7MY23 - C7MY23_SACVD

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Protein
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
Gene
gpsA, Svir_09130
Organism
Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + NAD(P)+ = glycerone phosphate + NAD(P)H.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei108 – 1081NAD; via amide nitrogen By similarityUniRule annotation
Binding sitei108 – 1081Substrate By similarityUniRule annotation
Binding sitei142 – 1421NAD; via amide nitrogen By similarityUniRule annotation
Active sitei193 – 1931Proton acceptor By similarityUniRule annotation
Binding sitei257 – 2571NAD By similarityUniRule annotation
Binding sitei284 – 2841NAD By similarityUniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi10 – 156NAD By similarityUniRule annotation

GO - Molecular functioni

  1. NAD binding Source: InterPro
  2. glycerol-3-phosphate dehydrogenase [NAD(P)+] activity Source: UniProtKB-HAMAP
  3. glycerol-3-phosphate dehydrogenase [NAD+] activity Source: UniProtKB-EC
  4. glycerol-3-phosphate dehydrogenase [NADP+] activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. glycerol-3-phosphate biosynthetic process Source: UniProtKB-HAMAP
  3. glycerol-3-phosphate catabolic process Source: InterPro
  4. glycerophospholipid metabolic process Source: UniProtKB-UniPathway
  5. phospholipid biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Lipid biosynthesis, Lipid metabolism, Phospholipid biosynthesisUniRule annotationSAAS annotations, Phospholipid metabolism

Keywords - Ligandi

NADUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciSVIR471857:GHAV-912-MONOMER.
UniPathwayiUPA00940.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenase [NAD(P)+]UniRule annotation (EC:1.1.1.94UniRule annotation)
Alternative name(s):
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
Gene namesi
Name:gpsAUniRule annotation
Ordered Locus Names:Svir_09130Imported
OrganismiSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)Imported
Taxonomic identifieri471857 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharomonospora
ProteomesiUP000000841: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Protein-protein interaction databases

STRINGi471857.Svir_09130.

Structurei

3D structure databases

ProteinModelPortaliC7MY23.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni257 – 2582Substrate binding By similarityUniRule annotation

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0240.
HOGENOMiHOG000246853.
KOiK00057.
OMAiHLLHCGK.
OrthoDBiEOG6JDWF4.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
HAMAPiMF_00394. NAD_Glyc3P_dehydrog.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11728. PTHR11728. 1 hit.
PfamiPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSiPR00077. GPDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS00957. NAD_G3PDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7MY23-1 [UniParc]FASTAAdd to Basket

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MSVQRVTVLG AGSWGTTFAK VLADAGRDVT LWARRAEVAD EIRTQHTNSS    50
YLPGVRLPER LTATSDAATA LEAADAVVFA VPSQKLRENL AAWRDLLPAD 100
AILVSLAKGV ELGTLKRMSE VISDITGVEP GDVVVVSGPN LAKEIAQQQP 150
AAAVLACADH DRAVAIQQAS FNSYFRPYTN TDVVGCELGG ACKNVIALSC 200
GMAAGLGYGT NTMATLITRG LAEMARLGAA LGADPLTFAG LAGVGDLVAT 250
CSSPLSRNRT FGERIGRGET MEQARAAQGG QVAEGVTSCR SIRELARRLD 300
VDMPITDAMY RVCHEGVDPG TVGAELLGRR QKHEWS 336
Length:336
Mass (Da):35,337
Last modified:October 13, 2009 - v1
Checksum:i14A3033E7C3ECACE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001683 Genomic DNA. Translation: ACU95971.1.
RefSeqiYP_003132798.1. NC_013159.1.

Genome annotation databases

EnsemblBacteriaiACU95971; ACU95971; Svir_09130.
GeneIDi8386250.
KEGGisvi:Svir_09130.
PATRICi23392214. VBISacVir111818_0903.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001683 Genomic DNA. Translation: ACU95971.1 .
RefSeqi YP_003132798.1. NC_013159.1.

3D structure databases

ProteinModelPortali C7MY23.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 471857.Svir_09130.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU95971 ; ACU95971 ; Svir_09130 .
GeneIDi 8386250.
KEGGi svi:Svir_09130.
PATRICi 23392214. VBISacVir111818_0903.

Phylogenomic databases

eggNOGi COG0240.
HOGENOMi HOG000246853.
KOi K00057.
OMAi HLLHCGK.
OrthoDBi EOG6JDWF4.

Enzyme and pathway databases

UniPathwayi UPA00940 .
BioCyci SVIR471857:GHAV-912-MONOMER.

Family and domain databases

Gene3Di 1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
HAMAPi MF_00394. NAD_Glyc3P_dehydrog.
InterProi IPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
PANTHERi PTHR11728. PTHR11728. 1 hit.
Pfami PF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSi PR00077. GPDHDRGNASE.
SUPFAMi SSF48179. SSF48179. 1 hit.
PROSITEi PS00957. NAD_G3PDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101.

Entry informationi

Entry nameiC7MY23_SACVD
AccessioniPrimary (citable) accession number: C7MY23
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: July 9, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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