C7MXV5 (C7MXV5_SACVD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL ACU98033.1

Gene names

Ordered Locus Names:

Svir_30580

Organism

Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) [Complete proteome] [HAMAP] EMBL ACU98033.1

Taxonomic identifier

471857 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Saccharomonospora

Protein attributes

Sequence length	1251 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7MXV5 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: F9926B4421ACC9CA	FASTA	1,251	138,898
	10 20 30 40 50 60 MSSSSPASQF GPNEWLVEEM YDRFLDDPSS VDAAWHEFFA DFQPSQDAQA RSEGAEQKSP 70 80 90 100 110 120 ANGQPATQTA PKQTAPATPT TSPSPKTESV AAPQTTPQGA KTKPATPKSE PPQSTPGSTG 130 140 150 160 170 180 TSATARTAPP KKPSEPERKP LRGVAATIAK NMDASLSVPT ATSVRAVPAK LMADNRIVIN 190 200 210 220 230 240 NHLRRARGGK VSYTHLIGYA MIRALHDFPN MNRHYAVIDG KPHVVTPEHI NLGLAIDMKG 250 260 270 280 290 300 KDGQRSLVVA SIKNCENMTF LQFWQAYEDI VRKARNNKLT ADDFAGTTIS LTNPGGIGTN 310 320 330 340 350 360 HSVPRLQQGQ GAIIGVGAME YPAPFQGTSE QTLNQLGVSK IMTLTSTYDH RIIQGAESGE 370 380 390 400 410 420 FLKRIHGLLL GEDGFYDDIF TSLRIPYEPV RWVEDIPEGE IDKTARVLKL IEAYRTRGHL 430 440 450 460 470 480 MADTDPLNYR QRRHEDLDIL SHGLTLWDLD REFAVGGFAG KERMKLRDVL GVLRDSYCRT 490 500 510 520 530 540 VGVEYTHILD PDERRWIQER VEVPHEKPSP AVQKYILSKL NAAEAFETFL QTKYVGQKRF 550 560 570 580 590 600 SLEGGETMIP LLDTVLDRAA EYQLDEVVIG MPHRGRLNVL ANIVGKPISQ IFQEFEGNLD 610 620 630 640 650 660 PGQAHGSGDV KYHLGAEGKY FRMFGDGETK VSLTANPSHL ETVDPVLEGI VRAKQDLLDK 670 680 690 700 710 720 GERDSGGFSV MPVLLHGDAA FAGQGVVAET LNLAMLRGYR TGGTVHVIIN NQVGFTTAPE 730 740 750 760 770 780 HARSSQYATD VAKMIGAPIF HVNGDDPEAA YWVARLAVDY RQTFNKDVVI DLICYRRRGH 790 800 810 820 830 840 NEGDDPSMTQ PRMYDVIDAK RSVRKTYTEA LIGRGDISME EAEAALRDFS TQLEHVFKEV 850 860 870 880 890 900 RELEKHPIAP SPSVEQRQQV PAQVPTAVTR DVIERIGDAF VNLPEGFTPH PRVKPVLERR 910 920 930 940 950 960 QKMSREGNID WAFGELLAFG SLALEGRLVR LSGQDSRRGT FSQRHAVLID RKTGEEFAPL 970 980 990 1000 1010 1020 QHLSEDQGRV MVYDSALSEY AAVGFEYGYS VANSEALVMW EAQFGDFVNG AQTVIDEYIS 1030 1040 1050 1060 1070 1080 SGEAKWGQVS DVVLLLPHGH EGQGPDHTSG RIERFLQLCA EHSMTVTMPS TPANYFHLLR 1090 1100 1110 1120 1130 1140 RHALDGVNRP LIVFTPKSML RNKAATSAVE DFIGDSKFLS VIGEQEIAPE DTRKVLLTSG 1150 1160 1170 1180 1190 1200 KLYWELVEER RKRGANDVAI IRIEQYYPLP KKKLRAEMEK YSHVDKVLWV QEEPENQGAW 1210 1220 1230 1240 1250 PFFGLNLPRR MPDVFPRLDV VARRPMAAPS AGSSKVHEVE QKALIAKAFE D

References

[1]

"Complete genome sequence of Saccharomonospora viridis type strain (P101)." Pati A., Sikorski J., Nolan M., Lapidus A., Copeland A., Glavina del Rio T., Lucas S., Chen F., Tice H., Pitluck S., Cheng J.-F., Chertkov O., Brettin T., Han C., Detter J.C., Kuske C., Bruce D., Goodwin L. , Chain P., D'haeseleer P., Chen A., Palaniappan K., Ivanova N., Mavromatis K., Mikhailova N., Rohde M., Tindall B.J., Goeker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:141-149(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001683 Genomic DNA. Translation: ACU98033.1.
RefSeq	YP_003134860.1. NC_013159.1.
3D structure databases
ProteinModelPortal	C7MXV5.
ModBase	Search...
Protein-protein interaction databases
STRING	C7MXV5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8388382.
GenomeReviews	Gene locus Svir_30580 in contig CP001683_GR.
KEGG	svi:Svir_30580.
PATRIC	23396672. VBISacVir111818_3113.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	EGDEPAF.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K01616.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7MXV5_SACVD

Accession

Primary (citable) accession number: C7MXV5

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	January 25, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)