C7MVT9 (C7MVT9_SACVD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD-like ligase domain-containing protein EMBL ACU97039.1

Gene names

Ordered Locus Names:

Svir_20210

Organism

Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) [Complete proteome] [HAMAP] EMBL ACU97039.1

Taxonomic identifier

471857 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Saccharomonospora › Saccharomonospora viridis

Protein attributes

Sequence length	376 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACU97039.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7MVT9 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: E2631BC967AD98D9	FASTA	376	41,596
	10 20 30 40 50 60 MISRGLFRGI LCRRLGIGTV VAVGTVALES PAVVLEGLLY LGDSAALETI HAEYENMAPP 70 80 90 100 110 120 TPLPPMLAVS GDVPEGDQWV YDWKWDGVRA IVGIEGGEVR VHSRALRDIT SRYPELQELA 130 140 150 160 170 180 AATRARLLLD GEIVALDEQG RPDFDRLQSR MQVGLPTPRM LRESPLYYYV LDLLVADGEN 190 200 210 220 230 240 LCGSSYRHRR DRLAELGLPA PPTIRPPDPH ARISGSGLLD IAAEHGFEGI MAKRLDSPYR 250 260 270 280 290 300 PGVRSTDWIN TPLRIRQEVV IGGWVPGRSR HAGTLGTLLL GAYDPSGALS YIGHVETGRP 310 320 330 340 350 360 DPSSEALLGK LEALTRPSSP FATPVPRRRA RHARWVEPEL VGEVEHRRWT NDRTLWRPSW 370 QGLRTDREPA EVTLPV

References

[1]

"Complete genome sequence of Saccharomonospora viridis type strain (P101)." Pati A., Sikorski J., Nolan M., Lapidus A., Copeland A., Glavina del Rio T., Lucas S., Chen F., Tice H., Pitluck S., Cheng J.-F., Chertkov O., Brettin T., Han C., Detter J.C., Kuske C., Bruce D., Goodwin L. , Chain P., D'haeseleer P., Chen A., Palaniappan K., Ivanova N., Mavromatis K., Mikhailova N., Rohde M., Tindall B.J., Goeker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:141-149(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001683 Genomic DNA. Translation: ACU97039.1.
RefSeq	YP_003133866.1. NC_013159.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	471857.Svir_20210.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU97039; ACU97039; Svir_20210.
GeneID	8387348.
KEGG	svi:Svir_20210.
PATRIC	23394468. VBISacVir111818_2019.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222509.
KO	K01971.
OMA	HARWVEP.
Enzyme and pathway databases
BioCyc	SVIR471857:GHAV-2011-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR014146. DNA_pol_LigD_ligase_dom. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7MVT9_SACVD

Accession

Primary (citable) accession number: C7MVT9

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 29, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)