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C7MVT9

- C7MVT9_SACVD

UniProt

C7MVT9 - C7MVT9_SACVD

Protein
Submitted name:

DNA polymerase LigD-like ligase domain-containing protein

Gene

Svir_20210

Organism
Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSVIR471857:GHAV-2011-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD-like ligase domain-containing proteinImported
    Gene namesi
    Ordered Locus Names:Svir_20210Imported
    OrganismiSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)Imported
    Taxonomic identifieri471857 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharomonospora
    ProteomesiUP000000841: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi471857.Svir_20210.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiHARWVEP.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C7MVT9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MISRGLFRGI LCRRLGIGTV VAVGTVALES PAVVLEGLLY LGDSAALETI    50
    HAEYENMAPP TPLPPMLAVS GDVPEGDQWV YDWKWDGVRA IVGIEGGEVR 100
    VHSRALRDIT SRYPELQELA AATRARLLLD GEIVALDEQG RPDFDRLQSR 150
    MQVGLPTPRM LRESPLYYYV LDLLVADGEN LCGSSYRHRR DRLAELGLPA 200
    PPTIRPPDPH ARISGSGLLD IAAEHGFEGI MAKRLDSPYR PGVRSTDWIN 250
    TPLRIRQEVV IGGWVPGRSR HAGTLGTLLL GAYDPSGALS YIGHVETGRP 300
    DPSSEALLGK LEALTRPSSP FATPVPRRRA RHARWVEPEL VGEVEHRRWT 350
    NDRTLWRPSW QGLRTDREPA EVTLPV 376
    Length:376
    Mass (Da):41,596
    Last modified:October 13, 2009 - v1
    Checksum:iE2631BC967AD98D9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001683 Genomic DNA. Translation: ACU97039.1.
    RefSeqiYP_003133866.1. NC_013159.1.

    Genome annotation databases

    EnsemblBacteriaiACU97039; ACU97039; Svir_20210.
    GeneIDi8387348.
    KEGGisvi:Svir_20210.
    PATRICi23394468. VBISacVir111818_2019.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001683 Genomic DNA. Translation: ACU97039.1 .
    RefSeqi YP_003133866.1. NC_013159.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 471857.Svir_20210.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU97039 ; ACU97039 ; Svir_20210 .
    GeneIDi 8387348.
    KEGGi svi:Svir_20210.
    PATRICi 23394468. VBISacVir111818_2019.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi HARWVEP.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci SVIR471857:GHAV-2011-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101Imported.

    Entry informationi

    Entry nameiC7MVT9_SACVD
    AccessioniPrimary (citable) accession number: C7MVT9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3