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C7MVT9

- C7MVT9_SACVD

UniProt

C7MVT9 - C7MVT9_SACVD

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Protein
Submitted name:

DNA polymerase LigD-like ligase domain-containing protein

Gene

Svir_20210

Organism
Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSVIR471857:GHAV-2011-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD-like ligase domain-containing proteinImported
Gene namesi
Ordered Locus Names:Svir_20210Imported
OrganismiSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)Imported
Taxonomic identifieri471857 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeSaccharomonospora
ProteomesiUP000000841: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471857.Svir_20210.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222509.
KOiK01971.
OMAiHARWVEP.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7MVT9-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MISRGLFRGI LCRRLGIGTV VAVGTVALES PAVVLEGLLY LGDSAALETI
60 70 80 90 100
HAEYENMAPP TPLPPMLAVS GDVPEGDQWV YDWKWDGVRA IVGIEGGEVR
110 120 130 140 150
VHSRALRDIT SRYPELQELA AATRARLLLD GEIVALDEQG RPDFDRLQSR
160 170 180 190 200
MQVGLPTPRM LRESPLYYYV LDLLVADGEN LCGSSYRHRR DRLAELGLPA
210 220 230 240 250
PPTIRPPDPH ARISGSGLLD IAAEHGFEGI MAKRLDSPYR PGVRSTDWIN
260 270 280 290 300
TPLRIRQEVV IGGWVPGRSR HAGTLGTLLL GAYDPSGALS YIGHVETGRP
310 320 330 340 350
DPSSEALLGK LEALTRPSSP FATPVPRRRA RHARWVEPEL VGEVEHRRWT
360 370
NDRTLWRPSW QGLRTDREPA EVTLPV
Length:376
Mass (Da):41,596
Last modified:October 13, 2009 - v1
Checksum:iE2631BC967AD98D9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001683 Genomic DNA. Translation: ACU97039.1.
RefSeqiYP_003133866.1. NC_013159.1.

Genome annotation databases

EnsemblBacteriaiACU97039; ACU97039; Svir_20210.
GeneIDi8387348.
KEGGisvi:Svir_20210.
PATRICi23394468. VBISacVir111818_2019.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001683 Genomic DNA. Translation: ACU97039.1 .
RefSeqi YP_003133866.1. NC_013159.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 471857.Svir_20210.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU97039 ; ACU97039 ; Svir_20210 .
GeneIDi 8387348.
KEGGi svi:Svir_20210.
PATRICi 23394468. VBISacVir111818_2019.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000222509.
KOi K01971.
OMAi HARWVEP.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci SVIR471857:GHAV-2011-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101Imported.

Entry informationi

Entry nameiC7MVT9_SACVD
AccessioniPrimary (citable) accession number: C7MVT9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: October 1, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3