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Protein
Submitted name:

tRNA/rRNA cytosine-C5-methylase

Gene

Svir_15690

Organism
Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei329S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei353S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei369S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei422NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSVIR471857:G1GFJ-1551-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
tRNA/rRNA cytosine-C5-methylaseImported
Gene namesi
Ordered Locus Names:Svir_15690Imported
OrganismiSaccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101)Imported
Taxonomic identifieri471857 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeSaccharomonospora
Proteomesi
  • UP000000841 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi471857.Svir_15690

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini196 – 483SAM_MT_RSMB_NOPInterPro annotationAdd BLAST288

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni304 – 310S-adenosyl-L-methionine bindingPROSITE-ProRule annotation7

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ Bacteria
COG0144 LUCA
HOGENOMiHOG000037302
KOiK03500
OMAiLRVNRQH
OrthoDBiPOG091H02E2

Family and domain databases

Gene3Di1.10.940.10, 1 hit
InterProiView protein in InterPro
IPR001678 MeTrfase_RsmB/NOP2
IPR035926 NusB-like_sf
IPR006027 NusB_RsmB_TIM44
IPR023267 RCMT
IPR029063 SAM-dependent_MTases
PfamiView protein in Pfam
PF01189 Methyltr_RsmB-F, 1 hit
PF01029 NusB, 1 hit
PRINTSiPR02008 RCMTFAMILY
SUPFAMiSSF48013 SSF48013, 1 hit
SSF53335 SSF53335, 1 hit
PROSITEiView protein in PROSITE
PS51686 SAM_MT_RSMB_NOP, 1 hit

Sequencei

Sequence statusi: Complete.

C7MSK6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTGDRRGRPR PQRGYRDRRG HRPAPRKQGP RRPPTRDPAR RAAFDALRAV
60 70 80 90 100
TERDAYANLI LPELLRQRRI TGRDAALATE LTYGTARATG LLDAIVARCV
110 120 130 140 150
DRKLDTVDPV VRDALRLGAY QLLRTRIPHH AAVASTVDLV REDAGSRVAG
160 170 180 190 200
FVNAVLRRVS EKDEQQWLAE LTADSSDPLA DLALRTSHPR WIARAFAEAL
210 220 230 240 250
GDKGDELRAA LEADDARPAV HLLAKPGQIS AEELAAITGG DVAPYSPYGV
260 270 280 290 300
HLPSGGGDLA ESEVIEEGLA TVQDEGSQLV AVASVNAPLG DAADGRDTRW
310 320 330 340 350
LDLCAGPGGK TVVLGCLAQT MGATVDAVEV AEHRARLVRE ATDGLPVTVH
360 370 380 390 400
VTDGRAPELD GDYDRVLVDA PCSGLGALRR RPEARWRKQP GDIAELTRLQ
410 420 430 440 450
TELLASAYRL VRPGGVVTYV VCSPHLAETE GVVMASAQRL GAELIDARVA
460 470 480
FPGVPHLGDG PTVQLWPHRH GTDAMFCAML RKPA
Length:484
Mass (Da):52,081
Last modified:October 13, 2009 - v1
Checksum:iB91C5A5533DBFC87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001683 Genomic DNA Translation: ACU96604.1
RefSeqiWP_015785917.1, NC_013159.1

Genome annotation databases

EnsemblBacteriaiACU96604; ACU96604; Svir_15690
KEGGisvi:Svir_15690

Similar proteinsi

Entry informationi

Entry nameiC7MSK6_SACVD
AccessioniPrimary (citable) accession number: C7MSK6
Entry historyiIntegrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 23, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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