C7MS40 (C7MS40_SACVD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sugar kinase, ribokinase EMBL ACU98896.1

Gene names

Ordered Locus Names:

Svir_39540

Organism

Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) [Complete proteome] [HAMAP] EMBL ACU98896.1

Taxonomic identifier

471857 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Pseudonocardineae › Pseudonocardiaceae › Saccharomonospora › Saccharomonospora viridis

Protein attributes

Sequence length	296 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the carbohydrate kinase pfkB family. RuleBase RU003704

Ontologies

Keywords
Molecular function	Kinase RuleBase RU003704 SAAS SAAS011611 EMBL ACU98896.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-ribose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	ribokinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7MS40 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 98D6118536904836	FASTA	296	29,742
	10 20 30 40 50 60 MSAQVLVVGS ANADLVVTVD RRPTGGETVL GGDTEILPGG KGANTAVAAA RLGAEVALLG 70 80 90 100 110 120 AVGDDAHGRL LLDSLRESGV NTDLVRVVSR PTGLAFITVT PDGENSIIVS PGANHALRPE 130 140 150 160 170 180 DTAVVTAAPK VMVLSMEIPL DTVEHAITSA AGTATCTILN LSPVASVSES TLADVDILLV 190 200 210 220 230 240 NEHEAAWLLG MGERGGVLPN PELSKLLDLG PRAAVVTAGS RGAVIVRPTG LAEVPSPAVE 250 260 270 280 290 VVDTTGAGDA FAGALATALA RDSELPDAVA LAARVAALSV TRRGAQPSYP TVAELE

References

[1]

"Complete genome sequence of Saccharomonospora viridis type strain (P101)." Pati A., Sikorski J., Nolan M., Lapidus A., Copeland A., Glavina del Rio T., Lucas S., Chen F., Tice H., Pitluck S., Cheng J.-F., Chertkov O., Brettin T., Han C., Detter J.C., Kuske C., Bruce D., Goodwin L. , Chain P., D'haeseleer P., Chen A., Palaniappan K., Ivanova N., Mavromatis K., Mikhailova N., Rohde M., Tindall B.J., Goeker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P. Stand. Genomic Sci. 1:141-149(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001683 Genomic DNA. Translation: ACU98896.1.
RefSeq	YP_003135723.1. NC_013159.1.
3D structure databases
ProteinModelPortal	C7MS40.
ModBase	Search...
Protein-protein interaction databases
STRING	471857.Svir_39540.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU98896; ACU98896; Svir_39540.
GeneID	8389275.
KEGG	svi:Svir_39540.
PATRIC	23398522. VBISacVir111818_4024.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0524.
HOGENOM	HOG000235950.
KO	K00852.
OMA	CDPLIVN.
ProtClustDB	CLSK2554265.
Family and domain databases
InterPro	IPR002173. Carboh/pur_kinase_PfkB_CS. IPR011611. PfkB_dom. IPR002139. Ribokinase. [Graphical view]
Pfam	PF00294. PfkB. 1 hit. [Graphical view]
PRINTS	PR00990. RIBOKINASE.
PROSITE	PS00584. PFKB_KINASES_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7MS40_SACVD

Accession

Primary (citable) accession number: C7MS40

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)