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C7MQ31 (C7MQ31_SACVD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C7MQ31 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 5F2D760EFACF6FAF

FASTA47753,953
        10         20         30         40         50         60 
MAPRLEQYRN KRRKGHTPEP IPSVTLASTE GHGDTFVVHE HHARNLHWDV RLERDGRLIS 

        70         80         90        100        110        120 
FAVPKGLPTE PGTVRLAVRT EDHPLEYSTF SGEIPKGEYG GGHMSIWDRG TYETLKWGES 

       130        140        150        160        170        180 
KVSIVLHGER VHGKYVFFRT RESDWSVVRS DPPDDPEWTP IPSLLKPMLA VTGSLPDPEE 

       190        200        210        220        230        240 
DSDWAYEFKW DGVRALARVE GGRVTLFSRR GDDITGIYPE LRALGEDLGS TQAWLDGEIV 

       250        260        270        280        290        300 
AFRDGRPHFA TLQGRINAGA QKARRLSQRS PVTYLVFDLL HLDGHSCMGL PYWQRRNLLE 

       310        320        330        340        350        360 
QLDITGEHWR TPPSFPGAGR AVTEAAAEQR LEGVVAKRLD SPYRPGERSV DWRKITELRT 

       370        380        390        400        410        420 
LEVVIGGWRQ GRGRRSDTFG SLLLGIPNDG RLQYIGQVGT GFDEDALHAL TSRLHRLERR 

       430        440        450        460        470 
TSPFSEALPK DRTSGAHWVS PRLVGEVAFK SWTDDGRLRA PTWRGLRPDR DPEELAR 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001683 Genomic DNA. Translation: ACU98454.1.
RefSeqYP_003135281.1. NC_013159.1.

3D structure databases

ProteinModelPortalC7MQ31.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING471857.Svir_34920.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU98454; ACU98454; Svir_34920.
GeneID8388814.
KEGGsvi:Svir_34920.
PATRIC23397566. VBISacVir111818_3556.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAMVHRMDP.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycSVIR471857:GHAV-3477-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7MQ31_SACVD
AccessionPrimary (citable) accession number: C7MQ31
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)