C7MGG4 (C7MGG4_BRAFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endonuclease III EMBL ACU86397.1

Gene names

Ordered Locus Names:

Bfae_26220

Organism

Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) [Complete proteome] [HAMAP]

Taxonomic identifier

446465 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Dermabacteraceae › Brachybacterium › Brachybacterium faecium

Protein attributes

Sequence length	230 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Endonuclease EMBL ACU86397.1 Hydrolase Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	base-excision repair Inferred from electronic annotation. Source: InterPro
Molecular_function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA-(apurinic or apyrimidinic site) lyase activity Inferred from electronic annotation. Source: InterPro endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7MGG4 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 53F7EF229EEEBEE0	FASTA	230	24,427
	10 20 30 40 50 60 MSMSTPRSTD LPRPAGPADA SRVASRLAAL HAEARTELDH RDAFELLVAT VLSAQTTDVR 70 80 90 100 110 120 VNQVTPELFS RWPDPAALAA ADEGAVTEVV RPLGMGATRA RRLIGLAQGL LARHGGEVPD 130 140 150 160 170 180 DQAALEALPG VGRKTAHVVR GAWFGHSLLA VDTHVGRLAQ RLGWTTATTP RRVEEDVVAR 190 200 210 220 230 VEADGTGAPE EDLTILGLRL ILHGRRVCTA RAPRCGQCAL VDLCPREGVA

References

[1]

"Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10)." Lapidus A., Pukall R., Labuttii K., Copeland A., Del Rio T.G., Nolan M., Chen F., Lucas S., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Rohde M., Goker M., Pati A., Ivanova N., Mavrommatis K. , Chen A., Palaniappan K., D'haeseleer P., Chain P., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 1:3-11(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43885 / DSM 4810 / NCIB 9860.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001643 Genomic DNA. Translation: ACU86397.1.
RefSeq	YP_003155987.1. NC_013172.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	446465.Bfae_26220.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU86397; ACU86397; Bfae_26220.
GeneID	8401167.
KEGG	bfa:Bfae_26220.
PATRIC	21176923. VBIBraFae133938_2585.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0177.
HOGENOM	HOG000252208.
KO	K10773.
OMA	ACGACPV.
Enzyme and pathway databases
BioCyc	BFAE446465:GH3P-2616-MONOMER.
Family and domain databases
Gene3D	1.10.1670.10. 1 hit. 1.10.340.30. 1 hit.
InterPro	IPR011257. DNA_glycosylase. IPR005759. Endonuclease-III_Nth. IPR003651. Endouclease3_FeS-loop_motif. IPR003265. HhH-GPD_domain. IPR000445. HhH_motif. IPR023170. HTH_base_excis_C. [Graphical view]
Pfam	PF00633. HHH. 1 hit. PF00730. HhH-GPD. 1 hit. [Graphical view]
PIRSF	PIRSF001435. Nth. 1 hit.
SMART	SM00478. ENDO3c. 1 hit. SM00525. FES. 1 hit. [Graphical view]
SUPFAM	SSF48150. DNA_glycsylse. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7MGG4_BRAFD

Accession

Primary (citable) accession number: C7MGG4

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)