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Protein
Submitted name:

Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain

Gene

Bfae_20650

Organism
Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation, Two-component regulatory systemSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domainImported
Gene namesi
Ordered Locus Names:Bfae_20650Imported
OrganismiBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)Imported
Taxonomic identifieri446465 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesDermabacteraceaeBrachybacterium
Proteomesi
  • UP000001919 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi446465.Bfae_20650.

Structurei

3D structure databases

ProteinModelPortaliC7ME65.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 122Response regulatoryInterPro annotationAdd BLAST114
Domaini130 – 229OmpR/PhoB-type DNA-bindingInterPro annotationAdd BLAST100

Phylogenomic databases

eggNOGiENOG4105CK6. Bacteria.
COG0745. LUCA.
HOGENOMiHOG000034819.
KOiK07670.
OMAiSMIGYNV.
OrthoDBiPOG091H02GJ.

Family and domain databases

CDDicd00383. trans_reg_C. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001867. OmpR/PhoB-type_DNA-bd.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS51755. OMPR_PHOB. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7ME65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSMTTPSRI LVVDDDQAIA EMVGIVLRGK GYEVATSPDG ASALETFPRL
60 70 80 90 100
RPDLVLLDLM LPGMDGIEVC RRLRRESGVP IIMLTARTDT ADVVEGLEAG
110 120 130 140 150
ADDYLTKPFE PEELVARIKA RVRRSEEPTT EQLTIGDLTI DVDGHEVRRG
160 170 180 190 200
DQLISLTPLE FDLLTQLARK PWQVFTRDVL LRDVWGYRHS ADTRLVNVHV
210 220 230
QRLRSKIEHD PENPSIVVTV RGVGYRAGGA S
Length:231
Mass (Da):25,709
Last modified:October 13, 2009 - v1
Checksum:iF74AE21F83E3F77C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001643 Genomic DNA. Translation: ACU85872.1.
RefSeqiWP_015776081.1. NC_013172.1.
YP_003155462.1. NC_013172.1.

Genome annotation databases

EnsemblBacteriaiACU85872; ACU85872; Bfae_20650.
GeneIDi8400611.
KEGGibfa:Bfae_20650.
PATRICi21175821. VBIBraFae133938_2048.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001643 Genomic DNA. Translation: ACU85872.1.
RefSeqiWP_015776081.1. NC_013172.1.
YP_003155462.1. NC_013172.1.

3D structure databases

ProteinModelPortaliC7ME65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446465.Bfae_20650.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU85872; ACU85872; Bfae_20650.
GeneIDi8400611.
KEGGibfa:Bfae_20650.
PATRICi21175821. VBIBraFae133938_2048.

Phylogenomic databases

eggNOGiENOG4105CK6. Bacteria.
COG0745. LUCA.
HOGENOMiHOG000034819.
KOiK07670.
OMAiSMIGYNV.
OrthoDBiPOG091H02GJ.

Family and domain databases

CDDicd00383. trans_reg_C. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001867. OmpR/PhoB-type_DNA-bd.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
PF00486. Trans_reg_C. 1 hit.
[Graphical view]
SMARTiSM00448. REC. 1 hit.
SM00862. Trans_reg_C. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS51755. OMPR_PHOB. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC7ME65_BRAFD
AccessioniPrimary (citable) accession number: C7ME65
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: November 30, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.