Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

tRNA/rRNA cytosine-C5-methylase

Gene

Bfae_16120

Organism
Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei355S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei384S-adenosyl-L-methioninePROSITE-ProRule annotation1
Binding sitei402S-adenosyl-L-methioninePROSITE-ProRule annotation1
Active sitei455NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotationSAAS annotationImported, RNA-bindingPROSITE-ProRule annotationSAAS annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
tRNA/rRNA cytosine-C5-methylaseImported
Gene namesi
Ordered Locus Names:Bfae_16120Imported
OrganismiBrachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860)Imported
Taxonomic identifieri446465 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesDermabacteraceaeBrachybacterium
Proteomesi
  • UP000001919 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi446465.Bfae_16120.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini223 – 525SAM_MT_RSMB_NOPInterPro annotationAdd BLAST303

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.PROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiView protein in InterPro
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
PfamiView protein in Pfam
PF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiView protein in PROSITE
PS51686. SAM_MT_RSMB_NOP. 1 hit.

Sequencei

Sequence statusi: Complete.

C7MCY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDERRGSRD RGRHTPDRGR RDDRRDGRPR DEQGRTRSGS RGHGGPRRGH
60 70 80 90 100
SASRPAERSR RSTPSRQVAL EGLRLVREED SYANLVLPRL LRSHRVSGRD
110 120 130 140 150
AAFTTELFYG SLRAQGRLDA ILTACVDRPL EEVDPALRDV LRLGAYQLLD
160 170 180 190 200
MSVAPHAATS ETVALARAEV GAGGASFVNA VLRRVGEKDL PQWIAEVAPD
210 220 230 240 250
RDQDPTGHLA VVHSHPRWVV RALTDALAGH GRSREEIDEL LAAQNAAPAV
260 270 280 290 300
SLVMRPGLTD LDELIDHGAS QGHLSIFGAS WPAGDPGGMD PVKEGRVAVQ
310 320 330 340 350
DEGSQLAALA LALGADDLVQ GDDAHWLDLC AGPGGKTALL GGLTIDHDAD
360 370 380 390 400
LLAVELQEHR TELVDRAVAT LREAGCEIET RTADGTVLGA ELPGRFSRVL
410 420 430 440 450
ADVPCSGLGA LRRRPEARWR RSPGDIGQLG GLQRDLLASA LDAAAPGGVV
460 470 480 490 500
AYVTCSPHLA ETRLIVADVM KRRTDAEQLD ARDAVRAGVL PAAQQDLDLG
510 520 530 540 550
AGPAVQLWPH VHGTDAMYIS LLRKLPAPSA APTTPAEPAT AEPTEEGTPT

A
Length:551
Mass (Da):58,771
Last modified:October 13, 2009 - v1
Checksum:iD411263EFB3A128C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001643 Genomic DNA. Translation: ACU85439.1.
RefSeqiWP_012805210.1. NC_013172.1.
YP_003155029.1. NC_013172.1.

Genome annotation databases

EnsemblBacteriaiACU85439; ACU85439; Bfae_16120.
GeneIDi8400158.
KEGGibfa:Bfae_16120.
PATRICi21174907. VBIBraFae133938_1605.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001643 Genomic DNA. Translation: ACU85439.1.
RefSeqiWP_012805210.1. NC_013172.1.
YP_003155029.1. NC_013172.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446465.Bfae_16120.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU85439; ACU85439; Bfae_16120.
GeneIDi8400158.
KEGGibfa:Bfae_16120.
PATRICi21174907. VBIBraFae133938_1605.

Phylogenomic databases

eggNOGiENOG4105CYJ. Bacteria.
COG0144. LUCA.
HOGENOMiHOG000037302.
KOiK03500.
OMAiHIGLYQL.
OrthoDBiPOG091H02E2.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
3.40.50.150. 1 hit.
InterProiView protein in InterPro
IPR001678. MeTrfase_RsmB/NOP2.
IPR006027. NusB_RsmB_TIM44.
IPR023267. RCMT.
IPR029063. SAM-dependent_MTases.
PfamiView protein in Pfam
PF01189. Methyltr_RsmB-F. 1 hit.
PF01029. NusB. 1 hit.
PRINTSiPR02008. RCMTFAMILY.
SUPFAMiSSF48013. SSF48013. 1 hit.
SSF53335. SSF53335. 1 hit.
PROSITEiView protein in PROSITE
PS51686. SAM_MT_RSMB_NOP. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC7MCY2_BRAFD
AccessioniPrimary (citable) accession number: C7MCY2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 18, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.