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C7M9I7 (C7M9I7_CAPOD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamate--tRNA ligase HAMAP MF_00022
EC=6.1.1.17 HAMAP MF_00022
Alternative name(s):
Glutamyl-tRNA synthetase HAMAP MF_00022
Gene names
Name:gltX HAMAP MF_00022
Ordered Locus Names:Coch_2027
OrganismCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus) [Complete proteome] [HAMAP]
Taxonomic identifier521097 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Capnocytophaga

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) By similarity. HAMAP MF_00022

Catalytic activity

ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu). HAMAP MF_00022

Subunit structure

Monomer By similarity. HAMAP MF_00022

Subcellular location

Cytoplasm By similarity HAMAP MF_00022.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00022 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif8 – 1811"HIGH" region By similarity HAMAP MF_00022
Motif257 – 2615"KMSKS" region By similarity HAMAP MF_00022

Sites

Binding site2601ATP By similarity HAMAP MF_00022

Sequences

Sequence LengthMass (Da)Tools
C7M9I7 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 890E4CF8D43041C8

FASTA50057,180
        10         20         30         40         50         60 
MVRVRFAPSP TGALHIGGVR TALFNYLFAK KHGGDFLLRI EDTDQNRYVE GAEQYIINSL 

        70         80         90        100        110        120 
NWLGLTYDEG VGKEGKHAPY RQSERKPLYK QYADTLINNG WAYYAFDTAE ALDTARKEAE 

       130        140        150        160        170        180 
AKGETFIYNW ATRDALQNSL SLSKEEVQQR LERGDEYVIR FKMPHNEQLK MNDMIRGEVT 

       190        200        210        220        230        240 
IDTSTLDDKV LFKSDGMPTY HLANIVDDHL MEITHVIRGE EWLPSMALHL LLYRAFGWQA 

       250        260        270        280        290        300 
PAFAHLPLIL KPVGNGKLSK RDGIKLGFPV FPMDWTENGE TLKGFSGEGY FPEALINFLA 

       310        320        330        340        350        360 
LLGWNPGTDE EIFTIEQLVR LFDLEKVHKA GARFDPEKIK WFNHQYLQMK PNAELATLFQ 

       370        380        390        400        410        420 
KDLTQRGVTV PMATIEKVVG LIKERATFVS DFWELSKFFF EAPAQYDEKA LKKQWKEQTP 

       430        440        450        460        470        480 
EIVKEVSEVL KNTSNFTSVV LEEAVKQYME TKSLGFGQVM PPLRLALVGE LKGPHVFDII 

       490        500 
EVIGKEETLR RLDALLSAEK

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001632 Genomic DNA. Translation: ACU93571.1.
RefSeqYP_003142132.1. NC_013162.1.

3D structure databases

ProteinModelPortalC7M9I7.
ModBaseSearch...

Protein-protein interaction databases

STRINGC7M9I7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8368488.
GenomeReviewsGene locus Coch_2027 in contig CP001632_GR.
KEGGcoc:Coch_2027.
PATRIC21272866. VBICapOch61160_2005.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAMAHIPLI.
ProtClustDBPRK01406.

Family and domain databases

HAMAPMF_00022_B. Glu_tRNA_synth_B.
[Tree]
InterProIPR008925. aa-tRNA-synth_I_codon-bd.
IPR020751. aa-tRNA-synth_I_codon-bd_sub2.
IPR001412. aa-tRNA-synth_I_CS.
IPR004527. Glu-tRNA-synth_Ib_bac/mito.
IPR000924. Glu/Gln-tRNA-synth_Ib.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
Gene3DG3DSA:1.10.1160.10. Glu/Gln-tRNA-synth_Ic_a-bdl. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 2 hits.
G3DSA:1.10.10.350. tRNA_synt_bd. 1 hit.
KOK01885.
PANTHERPTHR10119. Glu_tRNA-synt_1c. 1 hit.
PTHR10119:SF1. PTHR10119:SF1. 1 hit.
PfamPF00749. tRNA-synt_1c. 1 hit.
[Graphical view]
PRINTSPR00987. TRNASYNTHGLU.
SUPFAMSSF48163. tRNA-synt_bind. 1 hit.
TIGRFAMsTIGR00464. GltX_bact. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7M9I7_CAPOD
AccessionPrimary (citable) accession number: C7M9I7
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 25, 2012
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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