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Protein

Beta-galactosidase

Gene

Coch_1807

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC
  2. carbohydrate binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-1856-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidaseUniRule annotationSAAS annotation (EC:3.2.1.23UniRule annotationSAAS annotation)
Alternative name(s):
LactaseUniRule annotation
Gene namesi
Ordered Locus Names:Coch_1807Imported
OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
Taxonomic identifieri521097 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
ProteomesiUP000006650 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PotentialImportedAdd
BLAST
Chaini21 – 10351015 PotentialImportedPRO_5000507247Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi521097.Coch_1807.

Structurei

3D structure databases

ProteinModelPortaliC7M892.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG3250.
HOGENOMiHOG000252444.
KOiK01190.
OMAiPFENIAK.
OrthoDBiEOG6XWV0T.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SMARTiSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C7M892-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNYLYIIIS FFLTIVSYAQ HLDSIFENPA LQEINRMSMR ASYFPFENIA
60 70 80 90 100
KAKNGMIEQS ARFLNLNGLW SFLWKEDYRQ LPKDFYKTNF NESQWKKIPV
110 120 130 140 150
PSNWEVQGYG IPIYVNASYE FNQKNPTPPD IPDSLQQNAG LYRKTFDLPT
160 170 180 190 200
SWQGEKVYLH LGAVKSAFKL YINGKFVGMG KDSKLASEFD ITPYITKGKN
210 220 230 240 250
LIAMEVRRWT DASYLECQDM WRFSGISRDC YLYMRPKVHL YDLSISAGLD
260 270 280 290 300
KNYTNGKLTT SVEVWNETPS DVSKYQVEVS LFDKEQLLYQ EQKATIGLKK
310 320 330 340 350
AFGKTELQFE AQLPQVRAWS AETPYLYRLQ MALYDAEGKV KEVVSRPIGF
360 370 380 390 400
RTIEIEGANI LVNGKRILFK GVNRHETDPH TGQVVSQEQM ENDVKQMKAL
410 420 430 440 450
NFNAVRTSHY PNDPYFYDLC DKYGLYVMDE ANIESHGMHY EMDKTIGNDP
460 470 480 490 500
VWEYAHLLRM ERMVKRDKNH PSVLFWSMGN ESGNGWNFYK GYQHIKGLDS
510 520 530 540 550
SRPIHYELAH YDWNTDIESR MYRRIPFLID YALSNHTKPF LQCEYAHAMG
560 570 580 590 600
NSVGNFQEYW DVYEHYPKLQ GGFIWDFIDQ GLYKTLSNGK KIVTYGGDYG
610 620 630 640 650
DKNTPSDNNF LINGVIASDR SWHPHAYEVR KVQQEIGFQY QNNQLILRNK
660 670 680 690 700
HFFKDLLNYE IYWQLLKEGV PVQSGNITNL IVLPQSEATF LLPPLKTDDK
710 720 730 740 750
AEYILQCTAR LKQDEGLLKK GTELAFAEFP LTSYSPQKAI ADTTPLQVEE
760 770 780 790 800
TASHILLYNK HYTAKIDKQT GKWVSFQVKN EELFAPEGLE VNLWRAGTDN
810 820 830 840 850
DFGAGLPKKL QQLQEADKKA DSVRISVEKL NSGQVKITLR KRLVEGTINY
860 870 880 890 900
TQELLFDGKP SVTVSNHFKP LKNDKTLTFK IGNHLTLLPF QRIQWYGRGP
910 920 930 940 950
WESYWDRKTS AMVGLYEGAI VSQYYPYVRP QENGNKTDVR WAKLSKKKGV
960 970 980 990 1000
NIAIYSTGSL LNINALPYSP AQLFPGIEKG QTHAGELTPD KYTHLDIDLQ
1010 1020 1030
QLGLGGDNSW GNLPMEQYLL YLYQPYSYSY RIEAF
Length:1,035
Mass (Da):119,753
Last modified:October 12, 2009 - v1
Checksum:iE06928076DAEAAD5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU93352.1.
RefSeqiYP_003141913.1. NC_013162.1.

Genome annotation databases

EnsemblBacteriaiACU93352; ACU93352; Coch_1807.
KEGGicoc:Coch_1807.
PATRICi21272406. VBICapOch61160_1788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU93352.1.
RefSeqiYP_003141913.1. NC_013162.1.

3D structure databases

ProteinModelPortaliC7M892.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521097.Coch_1807.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU93352; ACU93352; Coch_1807.
KEGGicoc:Coch_1807.
PATRICi21272406. VBICapOch61160_1788.

Phylogenomic databases

eggNOGiCOG3250.
HOGENOMiHOG000252444.
KOiK01190.
OMAiPFENIAK.
OrthoDBiEOG6XWV0T.

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-1856-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SMARTiSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMiSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

Entry informationi

Entry nameiC7M892_CAPOD
AccessioniPrimary (citable) accession number: C7M892
Entry historyi
Integrated into UniProtKB/TrEMBL: October 12, 2009
Last sequence update: October 12, 2009
Last modified: March 31, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.