Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C7M892

- C7M892_CAPOD

UniProt

C7M892 - C7M892_CAPOD

Protein

Beta-galactosidase

Gene

Coch_1807

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationSAAS annotationImported, Hydrolase

    Enzyme and pathway databases

    BioCyciCOCH521097:GH5D-1856-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Alternative name(s):
    LactaseUniRule annotation
    Gene namesi
    Ordered Locus Names:Coch_1807Imported
    OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
    Taxonomic identifieri521097 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
    ProteomesiUP000006650: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020 PotentialImportedAdd
    BLAST
    Chaini21 – 10351015 PotentialImportedPRO_5000507247Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi521097.Coch_1807.

    Structurei

    3D structure databases

    ProteinModelPortaliC7M892.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 2 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG3250.
    HOGENOMiHOG000252444.
    KOiK01190.
    OMAiDNFIAMH.
    OrthoDBiEOG6XWV0T.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    2.60.40.320. 2 hits.
    2.70.98.10. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR004199. B-gal_small/dom_5.
    IPR011013. Gal_mutarotase_SF_dom.
    IPR008979. Galactose-bd-like.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR006101. Glyco_hydro_2.
    IPR013812. Glyco_hydro_2/20_Ig-like.
    IPR023232. Glyco_hydro_2_AS.
    IPR023230. Glyco_hydro_2_CS.
    IPR006102. Glyco_hydro_2_Ig-like.
    IPR006104. Glyco_hydro_2_N.
    IPR006103. Glyco_hydro_2_TIM.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02929. Bgal_small_N. 1 hit.
    PF00703. Glyco_hydro_2. 1 hit.
    PF02836. Glyco_hydro_2_C. 1 hit.
    PF02837. Glyco_hydro_2_N. 1 hit.
    [Graphical view]
    PRINTSiPR00132. GLHYDRLASE2.
    SMARTiSM01038. Bgal_small_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF49303. SSF49303. 2 hits.
    SSF49785. SSF49785. 1 hit.
    SSF51445. SSF51445. 1 hit.
    SSF74650. SSF74650. 1 hit.
    PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
    PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C7M892-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNYLYIIIS FFLTIVSYAQ HLDSIFENPA LQEINRMSMR ASYFPFENIA     50
    KAKNGMIEQS ARFLNLNGLW SFLWKEDYRQ LPKDFYKTNF NESQWKKIPV 100
    PSNWEVQGYG IPIYVNASYE FNQKNPTPPD IPDSLQQNAG LYRKTFDLPT 150
    SWQGEKVYLH LGAVKSAFKL YINGKFVGMG KDSKLASEFD ITPYITKGKN 200
    LIAMEVRRWT DASYLECQDM WRFSGISRDC YLYMRPKVHL YDLSISAGLD 250
    KNYTNGKLTT SVEVWNETPS DVSKYQVEVS LFDKEQLLYQ EQKATIGLKK 300
    AFGKTELQFE AQLPQVRAWS AETPYLYRLQ MALYDAEGKV KEVVSRPIGF 350
    RTIEIEGANI LVNGKRILFK GVNRHETDPH TGQVVSQEQM ENDVKQMKAL 400
    NFNAVRTSHY PNDPYFYDLC DKYGLYVMDE ANIESHGMHY EMDKTIGNDP 450
    VWEYAHLLRM ERMVKRDKNH PSVLFWSMGN ESGNGWNFYK GYQHIKGLDS 500
    SRPIHYELAH YDWNTDIESR MYRRIPFLID YALSNHTKPF LQCEYAHAMG 550
    NSVGNFQEYW DVYEHYPKLQ GGFIWDFIDQ GLYKTLSNGK KIVTYGGDYG 600
    DKNTPSDNNF LINGVIASDR SWHPHAYEVR KVQQEIGFQY QNNQLILRNK 650
    HFFKDLLNYE IYWQLLKEGV PVQSGNITNL IVLPQSEATF LLPPLKTDDK 700
    AEYILQCTAR LKQDEGLLKK GTELAFAEFP LTSYSPQKAI ADTTPLQVEE 750
    TASHILLYNK HYTAKIDKQT GKWVSFQVKN EELFAPEGLE VNLWRAGTDN 800
    DFGAGLPKKL QQLQEADKKA DSVRISVEKL NSGQVKITLR KRLVEGTINY 850
    TQELLFDGKP SVTVSNHFKP LKNDKTLTFK IGNHLTLLPF QRIQWYGRGP 900
    WESYWDRKTS AMVGLYEGAI VSQYYPYVRP QENGNKTDVR WAKLSKKKGV 950
    NIAIYSTGSL LNINALPYSP AQLFPGIEKG QTHAGELTPD KYTHLDIDLQ 1000
    QLGLGGDNSW GNLPMEQYLL YLYQPYSYSY RIEAF 1035
    Length:1,035
    Mass (Da):119,753
    Last modified:October 13, 2009 - v1
    Checksum:iE06928076DAEAAD5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU93352.1.
    RefSeqiYP_003141913.1. NC_013162.1.

    Genome annotation databases

    EnsemblBacteriaiACU93352; ACU93352; Coch_1807.
    GeneIDi8368255.
    KEGGicoc:Coch_1807.
    PATRICi21272406. VBICapOch61160_1788.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU93352.1 .
    RefSeqi YP_003141913.1. NC_013162.1.

    3D structure databases

    ProteinModelPortali C7M892.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 521097.Coch_1807.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU93352 ; ACU93352 ; Coch_1807 .
    GeneIDi 8368255.
    KEGGi coc:Coch_1807.
    PATRICi 21272406. VBICapOch61160_1788.

    Phylogenomic databases

    eggNOGi COG3250.
    HOGENOMi HOG000252444.
    KOi K01190.
    OMAi DNFIAMH.
    OrthoDBi EOG6XWV0T.

    Enzyme and pathway databases

    BioCyci COCH521097:GH5D-1856-MONOMER.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    2.60.40.320. 2 hits.
    2.70.98.10. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR004199. B-gal_small/dom_5.
    IPR011013. Gal_mutarotase_SF_dom.
    IPR008979. Galactose-bd-like.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR006101. Glyco_hydro_2.
    IPR013812. Glyco_hydro_2/20_Ig-like.
    IPR023232. Glyco_hydro_2_AS.
    IPR023230. Glyco_hydro_2_CS.
    IPR006102. Glyco_hydro_2_Ig-like.
    IPR006104. Glyco_hydro_2_N.
    IPR006103. Glyco_hydro_2_TIM.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02929. Bgal_small_N. 1 hit.
    PF00703. Glyco_hydro_2. 1 hit.
    PF02836. Glyco_hydro_2_C. 1 hit.
    PF02837. Glyco_hydro_2_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00132. GLHYDRLASE2.
    SMARTi SM01038. Bgal_small_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49303. SSF49303. 2 hits.
    SSF49785. SSF49785. 1 hit.
    SSF51445. SSF51445. 1 hit.
    SSF74650. SSF74650. 1 hit.
    PROSITEi PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
    PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

    Entry informationi

    Entry nameiC7M892_CAPOD
    AccessioniPrimary (citable) accession number: C7M892
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3