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C7M7T3

- C7M7T3_CAPOD

UniProt

C7M7T3 - C7M7T3_CAPOD

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Coch_0631

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciCOCH521097:GH5D-649-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:Coch_0631Imported
    OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
    Taxonomic identifieri521097 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
    ProteomesiUP000006650: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi521097.Coch_0631.

    Structurei

    3D structure databases

    ProteinModelPortaliC7M7T3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000031038.
    KOiK01176.
    OMAiSAFDFAC.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C7M7T3-1 [UniParc]FASTAAdd to Basket

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    MKYYIYLLAG LLAFSCDKKS NNDNPEPQNT VPLDLTKIDN GNRVMMQAFY    50
    WDVTPLGEWW NTITPKLTEW KANGVDRIWL PPATKGASGG YSMGYDPSDY 100
    FDFGEYNQHG TVKTRFGSRA ELENLISKAH ESGLQVIADI VIGHNNGGGK 150
    EWNPYRNKET YTLFDETHGN ASGKFNRNYE CFHPNKYATS DEGADFYGEQ 200
    DLSHKVPYVR EELWEKDNSM AKYYKNTMKF DGWRFDYVKS FGAWVVRDWL 250
    KAVGGFAVGE LWDGNPETLK KWVDESGASA FDFACFYALE KALDRNKDMH 300
    ELMTDTHPML RTLRTEKAVT FTANHDTEKD KIADNTIAPD KKLMAYAYIL 350
    THSGYPCIFY SDYENEAFKA KLQKLMLINR SLAVGEEKFH LASNTEYVAS 400
    RLGNEKSPGL VLFINNSTLP AKRTITTHWK NKTLIDYSGN SHLFFVTDSD 450
    GNVTIQVPAN SYTVWSIGK 469
    Length:469
    Mass (Da):53,491
    Last modified:October 13, 2009 - v1
    Checksum:i01D22FEF614A4A35
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU92189.1.
    RefSeqiYP_003140750.1. NC_013162.1.

    Genome annotation databases

    EnsemblBacteriaiACU92189; ACU92189; Coch_0631.
    GeneIDi8367048.
    KEGGicoc:Coch_0631.
    PATRICi21270014. VBICapOch61160_0620.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU92189.1 .
    RefSeqi YP_003140750.1. NC_013162.1.

    3D structure databases

    ProteinModelPortali C7M7T3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 521097.Coch_0631.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU92189 ; ACU92189 ; Coch_0631 .
    GeneIDi 8367048.
    KEGGi coc:Coch_0631.
    PATRICi 21270014. VBICapOch61160_0620.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000031038.
    KOi K01176.
    OMAi SAFDFAC.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci COCH521097:GH5D-649-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR015237. Alpha-amylase_C_pro.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF09154. DUF1939. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

    Entry informationi

    Entry nameiC7M7T3_CAPOD
    AccessioniPrimary (citable) accession number: C7M7T3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3