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C7M7T3

- C7M7T3_CAPOD

UniProt

C7M7T3 - C7M7T3_CAPOD

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Protein
Submitted name: Alpha amylase catalytic region
Gene
Coch_0631
Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-649-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Coch_0631Imported
OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
Taxonomic identifieri521097 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
ProteomesiUP000006650: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521097.Coch_0631.

Structurei

3D structure databases

ProteinModelPortaliC7M7T3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000031038.
KOiK01176.
OMAiSAFDFAC.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C7M7T3-1 [UniParc]FASTAAdd to Basket

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MKYYIYLLAG LLAFSCDKKS NNDNPEPQNT VPLDLTKIDN GNRVMMQAFY    50
WDVTPLGEWW NTITPKLTEW KANGVDRIWL PPATKGASGG YSMGYDPSDY 100
FDFGEYNQHG TVKTRFGSRA ELENLISKAH ESGLQVIADI VIGHNNGGGK 150
EWNPYRNKET YTLFDETHGN ASGKFNRNYE CFHPNKYATS DEGADFYGEQ 200
DLSHKVPYVR EELWEKDNSM AKYYKNTMKF DGWRFDYVKS FGAWVVRDWL 250
KAVGGFAVGE LWDGNPETLK KWVDESGASA FDFACFYALE KALDRNKDMH 300
ELMTDTHPML RTLRTEKAVT FTANHDTEKD KIADNTIAPD KKLMAYAYIL 350
THSGYPCIFY SDYENEAFKA KLQKLMLINR SLAVGEEKFH LASNTEYVAS 400
RLGNEKSPGL VLFINNSTLP AKRTITTHWK NKTLIDYSGN SHLFFVTDSD 450
GNVTIQVPAN SYTVWSIGK 469
Length:469
Mass (Da):53,491
Last modified:October 13, 2009 - v1
Checksum:i01D22FEF614A4A35
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001632 Genomic DNA. Translation: ACU92189.1.
RefSeqiYP_003140750.1. NC_013162.1.

Genome annotation databases

EnsemblBacteriaiACU92189; ACU92189; Coch_0631.
GeneIDi8367048.
KEGGicoc:Coch_0631.
PATRICi21270014. VBICapOch61160_0620.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001632 Genomic DNA. Translation: ACU92189.1 .
RefSeqi YP_003140750.1. NC_013162.1.

3D structure databases

ProteinModelPortali C7M7T3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 521097.Coch_0631.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU92189 ; ACU92189 ; Coch_0631 .
GeneIDi 8367048.
KEGGi coc:Coch_0631.
PATRICi 21270014. VBICapOch61160_0620.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000031038.
KOi K01176.
OMAi SAFDFAC.
OrthoDBi EOG65QWH3.

Enzyme and pathway databases

BioCyci COCH521097:GH5D-649-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845.

Entry informationi

Entry nameiC7M7T3_CAPOD
AccessioniPrimary (citable) accession number: C7M7T3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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