Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Prephenate dehydrogenase

Gene

Coch_1429

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. prephenate dehydrogenase (NADP+) activity Source: InterPro
  2. prephenate dehydrogenase activity Source: InterPro

GO - Biological processi

  1. tyrosine biosynthetic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-1462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Prephenate dehydrogenaseImported
Gene namesi
Ordered Locus Names:Coch_1429Imported
OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
Taxonomic identifieri521097 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
ProteomesiUP000006650: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818 PotentialImportedAdd
BLAST
Chaini19 – 279261 PotentialImportedPRO_5000507073Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi521097.Coch_1429.

Structurei

3D structure databases

ProteinModelPortaliC7M6A9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0287.
HOGENOMiHOG000043493.
KOiK04517.
OMAiMWRDICL.
OrthoDBiEOG6B8XMB.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR016040. NAD(P)-bd_dom.
IPR003099. Prephen_DH.
[Graphical view]
PfamiPF02153. PDH. 1 hit.
[Graphical view]
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS51176. PDH_ADH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C7M6A9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKAVIIGLG LIGGSFALEL KKRLGYHIAG IDLNPNHIEK ALALGIIDES
60 70 80 90 100
TDYNHLTDAD LVLIAVPVNH IGEVLIEVLN KVGEHTLVMD AGSVKGHICE
110 120 130 140 150
VVATHPHRQN FVAAHPMAGT EHSGPEAALY NLFDGKVMAL CEVEKSNWQL
160 170 180 190 200
LDRALSIVKA LNMRVKMMQP SDHDLHTAYV SHLSHVSSFM LGKTVLEIEK
210 220 230 240 250
DEAQIFDLAS TGFASTVRLA KSDAQMWCPI FLENKDNVLK ALNEYIKNLE
260 270
AFRTLIETEQ SEALTQSIHE ANYIRKILK
Length:279
Mass (Da):30,864
Last modified:October 13, 2009 - v1
Checksum:i9646674E599E012E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU92975.1.
RefSeqiYP_003141536.1. NC_013162.1.

Genome annotation databases

EnsemblBacteriaiACU92975; ACU92975; Coch_1429.
GeneIDi8367861.
KEGGicoc:Coch_1429.
PATRICi21271614. VBICapOch61160_1407.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU92975.1.
RefSeqiYP_003141536.1. NC_013162.1.

3D structure databases

ProteinModelPortaliC7M6A9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521097.Coch_1429.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU92975; ACU92975; Coch_1429.
GeneIDi8367861.
KEGGicoc:Coch_1429.
PATRICi21271614. VBICapOch61160_1407.

Phylogenomic databases

eggNOGiCOG0287.
HOGENOMiHOG000043493.
KOiK04517.
OMAiMWRDICL.
OrthoDBiEOG6B8XMB.

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-1462-MONOMER.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR016040. NAD(P)-bd_dom.
IPR003099. Prephen_DH.
[Graphical view]
PfamiPF02153. PDH. 1 hit.
[Graphical view]
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS51176. PDH_ADH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

Entry informationi

Entry nameiC7M6A9_CAPOD
AccessioniPrimary (citable) accession number: C7M6A9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 7, 2015
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.