C7M624 (C7M624_CAPOD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Nicotinate phosphoribosyltransferase HAMAP MF_00570
Short name=NAPRTase HAMAP MF_00570
EC=2.4.2.11 HAMAP MF_00570

Gene names

Name:	pncB HAMAP MF_00570
Ordered Locus Names:	Coch_0338

Organism

Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus) [Complete proteome] [HAMAP]

Taxonomic identifier

521097 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Capnocytophaga

Protein attributes

Sequence length	390 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate. HAMAP MF_00570 RuleBase RU003838 SAAS SAAS002638
Pathway	Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from nicotinate: step 1/1. HAMAP MF_00570 SAAS SAAS002638 Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate ribonucleotide from nicotinate: step 1/1. RuleBase RU003838
Subcellular location	Cytoplasm By similarity HAMAP MF_00570.
Sequence similarities	Belongs to the NAPRTase family. HAMAP MF_00570 RuleBase RU003838

Ontologies

Keywords
Biological process	Pyridine nucleotide biosynthesis HAMAP MF_00570 RuleBase RU003838 SAAS SAAS007229
Cellular component	Cytoplasm HAMAP MF_00570
Molecular function	Glycosyltransferase SAAS SAAS002638 HAMAP MF_00570 RuleBase RU003838 EMBL ACU91901.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	NAD biosynthetic process Inferred from electronic annotation. Source: HAMAP nicotinate nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nicotinate phosphoribosyltransferase activity Inferred from electronic annotation. Source: HAMAP nicotinate-nucleotide diphosphorylase (carboxylating) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7M624 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 859DF05D71936649	FASTA	390	44,682
	10 20 30 40 50 60 MSAILNSLLD NDFYKFTMQC GVVQLFPKNK ARYTFINRGK HEFPDGFAEA LREEVNNMAK 70 80 90 100 110 120 LKLTKAEKQF LIDNCPYLSP LYLDFLEGYR YDPSEVHIEQ NGSDLQVTVE GYWYRTILWE 130 140 150 160 170 180 VPLLSIISEL FYKLTKATAW TDEQVIANTR EKELLYKELG VVFAEFGTRR RHSYHVHDIV 190 200 210 220 230 240 MHTLMEGYNQ TFIGSSNVHF AMKYKVKPIG THAHEWFMFH AAEYSYKMAN ALSLEHWVDV 250 260 270 280 290 300 YRGDLGVALS DTYTTDVFFK QFDKKFSKLF DGVRHDSGDP IVFAEKTIAH YKKMGIDPLS 310 320 330 340 350 360 KYIIFSDGLN PKKVQAITEA CKGKIGISFG IGTDLTNDVG LRPMNIVMKL TGVLTSDNEW 370 380 390 VPTVKLSDEP NKHTGDPRMI ELAKGILAIS

References

[1]

"Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845)." Mavrommatis K., Gronow S., Saunders E., Land M., Lapidus A., Copeland A., Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Pati A., Ivanova N., Chen A. , Palaniappan K., Chain P., Hauser L., Chang Y.J., Jeffries C.D., Brettin T., Detter J.C., Han C., Bristow J., Goker M., Rohde M., Eisen J.A., Markowitz V., Kyrpides N.C., Klenk H.P., Hugenholtz P. Stand. Genomic Sci. 1:101-109(2009) [PubMed: 21304645] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001632 Genomic DNA. Translation: ACU91901.1.
RefSeq	YP_003140462.1. NC_013162.1.
3D structure databases
ProteinModelPortal	C7M624.
ModBase	Search...
Protein-protein interaction databases
STRING	C7M624.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8366744.
GenomeReviews	Gene locus Coch_0338 in contig CP001632_GR.
KEGG	coc:Coch_0338.
PATRIC	21269408. VBICapOch61160_0328.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	SFGWGTN.
ProtClustDB	PRK05321.
Family and domain databases
HAMAP	MF_00570. NAPRTase. [Tree]
InterPro	IPR006406. Nic_PRibTrfase. IPR015977. Nic_PRibTrfase-like. IPR007229. Nic_PRibTrfase-rel. IPR002638. Quinolinate_PRibosylTrfase_C. [Graphical view]
KO	K00763.
Pfam	PF04095. NAPRTase. 1 hit. [Graphical view]
PIRSF	PIRSF000484. NAPRT. 1 hit.
SUPFAM	SSF51690. Q_phspho_trans. 1 hit.
TIGRFAMs	TIGR01514. NAPRTase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7M624_CAPOD

Accession

Primary (citable) accession number: C7M624

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)