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C7M4P1 (C7M4P1_CAPOD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Aspartate 1-decarboxylase HAMAP-Rule MF_00446
EC=4.1.1.11 HAMAP-Rule MF_00446
Alternative name(s):
Aspartate alpha-decarboxylase HAMAP-Rule MF_00446
Gene names
Name:panD HAMAP-Rule MF_00446
Ordered Locus Names:Coch_0106
OrganismCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus) [Complete proteome] [HAMAP]
Taxonomic identifier521097 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Capnocytophaga ›

Protein attributes

Sequence length116 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine By similarity. HAMAP-Rule MF_00446 SAAS SAAS003190

Catalytic activity

L-aspartate = beta-alanine + CO2. HAMAP-Rule MF_00446 SAAS SAAS003190

Cofactor

Pyruvoyl group By similarity. HAMAP-Rule MF_00446 PIRSR PIRSR006246-1 SAAS SAAS003190

Pathway

Cofactor biosynthesis; (R)-pantothenate biosynthesis; beta-alanine from L-aspartate: step 1/1. HAMAP-Rule MF_00446 SAAS SAAS003190

Subunit structure

Heterooctamer of four alpha and four beta subunits By similarity. HAMAP-Rule MF_00446 SAAS SAAS003190

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00446 SAAS SAAS003190.

Post-translational modification

Is synthesized initially as an inactive proenzyme, which is activated by self-cleavage at a specific serine bond to produce a beta-subunit with a hydroxyl group at its C-terminus and an alpha-subunit with a pyruvoyl group at its N-terminus By similarity. HAMAP-Rule MF_00446 PIRSR PIRSR006246-3

Sequence similarities

Belongs to the PanD family. HAMAP-Rule MF_00446

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region73 – 753Substrate binding By similarity HAMAP-Rule MF_00446 PIRSR PIRSR006246-2

Sites

Active site251Schiff-base intermediate with substrate; via pyruvic acid By similarity HAMAP-Rule MF_00446 PIRSR PIRSR006246-1
Active site581Proton donor By similarity HAMAP-Rule MF_00446 PIRSR PIRSR006246-1
Binding site571Substrate By similarity HAMAP-Rule MF_00446 PIRSR PIRSR006246-2

Amino acid modifications

Modified residue251Pyruvic acid (Ser) By similarity HAMAP-Rule MF_00446 PIRSR PIRSR006246-3

Sequences

Sequence LengthMass (Da)Tools
C7M4P1 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 8F4F07A791459774

FASTA11612,910
        10         20         30         40         50         60 
MQIEVLKSKI HRVKVTGADL DYIGSITIDE DLLEAAQMIE GEKVSIVDVN NGERFETYII 

        70         80         90        100        110 
KGKRKSGAIV LNGPAARKVQ KGDIIIIISY ALMDFEEAKT FKPSIIFPNE TTNLIE

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001632 Genomic DNA. Translation: ACU91671.1.
RefSeqYP_003140232.1. NC_013162.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING521097.Coch_0106.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU91671; ACU91671; Coch_0106.
GeneID8366508.
KEGGcoc:Coch_0106.
PATRIC21268944. VBICapOch61160_0100.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0853.
HOGENOMHOG000221007.
KOK01579.
OMALYSKIHR.
ProtClustDBPRK05449.

Enzyme and pathway databases

BioCycCOCH521097:GH5D-109-MONOMER.
UniPathwayUPA00028; UER00002.

Family and domain databases

Gene3D2.40.40.20. 1 hit.
HAMAPMF_00446. PanD.
InterProIPR009010. Asp_de-COase-like_dom.
IPR003190. Asp_decarbox.
[Graphical view]
PANTHERPTHR21012. PTHR21012. 1 hit.
PfamPF02261. Asp_decarbox. 1 hit.
[Graphical view]
PIRSFPIRSF006246. Asp_decarbox. 1 hit.
ProDomPD009294. Asp_decarbox. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50692. Asp_decarb_fold. 1 hit.
TIGRFAMsTIGR00223. panD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7M4P1_CAPOD
AccessionPrimary (citable) accession number: C7M4P1
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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