C7M450 (C7M450_CAPOD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exo-alpha-sialidase EMBL ACU91582.1
EC=3.2.1.18 EMBL ACU91582.1

Gene names

Ordered Locus Names:

Coch_0016

Organism

Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus) [Complete proteome] [HAMAP]

Taxonomic identifier

521097 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Capnocytophaga › Capnocytophaga ochracea

Protein attributes

Sequence length	515 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACU91582.1
Molecular function	Glycosidase EMBL ACU91582.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pathogenesis Inferred from electronic annotation. Source: InterPro
Molecular_function	exo-alpha-(2->3)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->6)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->8)-sialidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL ACU91582.1
	Chain	22 – 515	494	Potential EMBL ACU91582.1		PRO_5000506861

Sequences

	Sequence		Length	Mass (Da)
	C7M450 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: F561AB1CFC84532D	FASTA	515	57,870
	10 20 30 40 50 60 MKQLFTIIAL CFLSFGYAQK GMTFTQTQMP LATDKDNLIT SFVLPIKQGT EVKELSLQFK 70 80 90 100 110 120 SKKLNLSELS VYVGANAKRE QATLFAKTSN LGCNTKLQGN FKATNDTLFV WISARTTQKP 130 140 150 160 170 180 DLLQKLYLSK VKLITNEAKI TLSNAKKEGQ RFAIALRQRK QDGIECYRIP GLVTTNKGTL 190 200 210 220 230 240 IAVYDNRYNN CKDLQEDIDV GMSRSTDGGQ TWEPMKKVID MGEWGGKTNR LNGVGDPAVL 250 260 270 280 290 300 VDEQTNTIWV MGLWQHGLDP QTMSWWGSKS GMTPEETGQI VVVKSEDDGK TWSEPINITS 310 320 330 340 350 360 QIKNPEWRLF FQGPGRGISM SNGTLVFAGQ FKDKDQVPHS TIIYSKDHGK TWHVGTGAKT 370 380 390 400 410 420 HTTESQVVEL SDGTLMLNMR DDRNRSNYEL SDNYHGRSVA VTADMGKTWV EHNTSRTALT 430 440 450 460 470 480 EPNCMASIIS YKDKKGKQYL FFSNPNDAKD RVNMTIKTSK DEGNTWDKLA SVLLYEQAAM 490 500 510 GYSCLTVIDN KYIGILYEGD GDLYFQKVPI KEFIK

References

[1]

"Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845)." Mavrommatis K., Gronow S., Saunders E., Land M., Lapidus A., Copeland A., Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Pati A., Ivanova N., Chen A. , Palaniappan K., Chain P., Hauser L., Chang Y.J., Jeffries C.D., Brettin T., Detter J.C., Han C., Bristow J., Goker M., Rohde M., Eisen J.A., Markowitz V., Kyrpides N.C., Klenk H.P., Hugenholtz P. Stand. Genomic Sci. 1:101-109(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001632 Genomic DNA. Translation: ACU91582.1.
RefSeq	YP_003140143.1. NC_013162.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	521097.Coch_0016.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU91582; ACU91582; Coch_0016.
GeneID	8366416.
KEGG	coc:Coch_0016.
PATRIC	21268772. VBICapOch61160_0016.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4409.
HOGENOM	HOG000252336.
KO	K01186.
OMA	GQTWEPM.
ProtClustDB	CLSK822190.
Enzyme and pathway databases
BioCyc	COCH521097:GH5D-17-MONOMER.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR026948. Sialidase. IPR026856. Sialidase_fam. IPR008377. Sialidase_trypan. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit. PTHR10628:SF5. PTHR10628:SF5. 1 hit.
PRINTS	PR01803. TCSIALIDASE.
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7M450_CAPOD

Accession

Primary (citable) accession number: C7M450

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)