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Protein
Submitted name:

Exo-alpha-sialidase

Gene

Coch_0016

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-(2->3)-sialidase activity Source: UniProtKB-EC
  2. exo-alpha-(2->6)-sialidase activity Source: UniProtKB-EC
  3. exo-alpha-(2->8)-sialidase activity Source: UniProtKB-EC

GO - Biological processi

  1. pathogenesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-17-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Exo-alpha-sialidaseImported (EC:3.2.1.18Imported)
Gene namesi
Ordered Locus Names:Coch_0016Imported
OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
Taxonomic identifieri521097 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
ProteomesiUP000006650: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121 PotentialImportedAdd
BLAST
Chaini22 – 515494 PotentialImportedPRO_5000506861Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi521097.Coch_0016.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG4409.
HOGENOMiHOG000252336.
KOiK01186.
OMAiLNMRDDR.
OrthoDBiEOG67DPK3.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
PRINTSiPR01803. TCSIALIDASE.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C7M450-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKQLFTIIAL CFLSFGYAQK GMTFTQTQMP LATDKDNLIT SFVLPIKQGT
60 70 80 90 100
EVKELSLQFK SKKLNLSELS VYVGANAKRE QATLFAKTSN LGCNTKLQGN
110 120 130 140 150
FKATNDTLFV WISARTTQKP DLLQKLYLSK VKLITNEAKI TLSNAKKEGQ
160 170 180 190 200
RFAIALRQRK QDGIECYRIP GLVTTNKGTL IAVYDNRYNN CKDLQEDIDV
210 220 230 240 250
GMSRSTDGGQ TWEPMKKVID MGEWGGKTNR LNGVGDPAVL VDEQTNTIWV
260 270 280 290 300
MGLWQHGLDP QTMSWWGSKS GMTPEETGQI VVVKSEDDGK TWSEPINITS
310 320 330 340 350
QIKNPEWRLF FQGPGRGISM SNGTLVFAGQ FKDKDQVPHS TIIYSKDHGK
360 370 380 390 400
TWHVGTGAKT HTTESQVVEL SDGTLMLNMR DDRNRSNYEL SDNYHGRSVA
410 420 430 440 450
VTADMGKTWV EHNTSRTALT EPNCMASIIS YKDKKGKQYL FFSNPNDAKD
460 470 480 490 500
RVNMTIKTSK DEGNTWDKLA SVLLYEQAAM GYSCLTVIDN KYIGILYEGD
510
GDLYFQKVPI KEFIK
Length:515
Mass (Da):57,870
Last modified:October 13, 2009 - v1
Checksum:iF561AB1CFC84532D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU91582.1.
RefSeqiWP_012796827.1. NC_013162.1.
YP_003140143.1. NC_013162.1.

Genome annotation databases

EnsemblBacteriaiACU91582; ACU91582; Coch_0016.
GeneIDi8366416.
KEGGicoc:Coch_0016.
PATRICi21268772. VBICapOch61160_0016.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU91582.1.
RefSeqiWP_012796827.1. NC_013162.1.
YP_003140143.1. NC_013162.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521097.Coch_0016.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU91582; ACU91582; Coch_0016.
GeneIDi8366416.
KEGGicoc:Coch_0016.
PATRICi21268772. VBICapOch61160_0016.

Phylogenomic databases

eggNOGiCOG4409.
HOGENOMiHOG000252336.
KOiK01186.
OMAiLNMRDDR.
OrthoDBiEOG67DPK3.

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-17-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
PRINTSiPR01803. TCSIALIDASE.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

Entry informationi

Entry nameiC7M450_CAPOD
AccessioniPrimary (citable) accession number: C7M450
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 7, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.