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C7M3Y1

- C7M3Y1_CAPOD

UniProt

C7M3Y1 - C7M3Y1_CAPOD

Protein

Beta-galactosidase

Gene

Coch_1011

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotationSAAS annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationSAAS annotationImported, Hydrolase

    Enzyme and pathway databases

    BioCyciCOCH521097:GH5D-1032-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Alternative name(s):
    LactaseUniRule annotation
    Gene namesi
    Ordered Locus Names:Coch_1011Imported
    OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
    Taxonomic identifieri521097 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
    ProteomesiUP000006650: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2222 PotentialImportedAdd
    BLAST
    Chaini23 – 1019997 PotentialImportedPRO_5000506838Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi521097.Coch_1011.

    Structurei

    3D structure databases

    ProteinModelPortaliC7M3Y1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 2 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG3250.
    HOGENOMiHOG000252443.
    KOiK01190.
    OMAiFATNERY.
    OrthoDBiEOG6XWV0T.

    Family and domain databases

    Gene3Di2.60.120.260. 1 hit.
    2.60.40.320. 2 hits.
    2.70.98.10. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR004199. B-gal_small/dom_5.
    IPR011013. Gal_mutarotase_SF_dom.
    IPR008979. Galactose-bd-like.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR006101. Glyco_hydro_2.
    IPR013812. Glyco_hydro_2/20_Ig-like.
    IPR023230. Glyco_hydro_2_CS.
    IPR006102. Glyco_hydro_2_Ig-like.
    IPR006104. Glyco_hydro_2_N.
    IPR006103. Glyco_hydro_2_TIM.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02929. Bgal_small_N. 1 hit.
    PF00703. Glyco_hydro_2. 1 hit.
    PF02836. Glyco_hydro_2_C. 1 hit.
    PF02837. Glyco_hydro_2_N. 1 hit.
    [Graphical view]
    PRINTSiPR00132. GLHYDRLASE2.
    SMARTiSM01038. Bgal_small_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF49303. SSF49303. 2 hits.
    SSF49785. SSF49785. 1 hit.
    SSF51445. SSF51445. 1 hit.
    SSF74650. SSF74650. 1 hit.
    PROSITEiPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C7M3Y1-1 [UniParc]FASTAAdd to Basket

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    MRIQHTLFLF IFALASSLST AQTHDWENLA VSSINTEKSH SHYEPAGKIL     50
    LNGNWQFAYF KHPSQVPADF FLGKGITQWD AIKVPSNWQL QSNRYDPPVF 100
    TNIKYPFEMN PPYTPKDYNP TGVYRTQFTV PSKWKGEQVF IHFAGVQSAM 150
    ELFINGKQVG YHEDAMLPAE FNITPYLKKG KNELYVKVLN WSDGSYIEDQ 200
    DFWRLSGIYR DVYLFATPEL RMRDFSVYPQ LDAQYRDATL QVQVEVQNLG 250
    EKVSDALVVQ TSLKDSKGNV IGTEKASIAD IAAGKEATVS AQIAVKNPLK 300
    WTAETPNLYK VELSLLTAKG KVLQSFTQNV GFRKIELSNG LLLVNGKPVK 350
    FKGVNRHEFD PYNGRTITRQ SMIDDIILMK THNINAVRTS HYPNQPEWYT 400
    LCDEYGLYVV DEANIESHGL WESGYYIGER PEWQKDIVER NVNMVARDKN 450
    HPCIIYWSMG NESGWGKNFD AAYEAIKALD PQKRPVHYES KNPAYAGVLS 500
    HYDIISNMYT ELNHLNNLFT EDPKRPVIIC EYAHSMGNSL GNFRKYWELF 550
    ATNERYQGGF TWDWKDQALR CKDKNGKEYW NIINHIDKAN VNDGLVNATG 600
    VPQPEMHELK KVYQYFNVKD IDIKTGLVLI SNSNYFVNSD EVYLQWELIE 650
    NGKPIANGVI NDLNIAPQSQ RALQIPFKTK LVQNGKEYFM NFHFKNKKAT 700
    AWASKDFEVA KEQLAFPNRV EREFTKPSDK KLTFTDEATN FTVKGDNFTA 750
    VFSKKTGGLS QFTHKGKNLL SEAMVPSFWR VPTDNDEGGF EQSYASAWRK 800
    AGLKEAMVTA TEMKATQIGE TQLKIVAHNR IETKAGNISQ QVTYLINGDG 850
    RIDISTNVEV PASVPALARV GMLLTLDKSF NKVEWYGKGP YETYADRKES 900
    AFVGIHSGAV KDMHFPYVMP SENGNHIDTR WLKLLSGTTE LYISAPKLFN 950
    FNVQDYSDDA LNQSKETQEL RRGDHTYLHI DEAQMGVGGD DSWSPRVHKE 1000
    FLLNQPYYHY EFSIQVGGK 1019
    Length:1,019
    Mass (Da):116,365
    Last modified:October 13, 2009 - v1
    Checksum:iB5BA794341532B2C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU92566.1.
    RefSeqiWP_015782223.1. NC_013162.1.
    YP_003141127.1. NC_013162.1.

    Genome annotation databases

    EnsemblBacteriaiACU92566; ACU92566; Coch_1011.
    GeneIDi8367431.
    KEGGicoc:Coch_1011.
    PATRICi21270762. VBICapOch61160_0992.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU92566.1 .
    RefSeqi WP_015782223.1. NC_013162.1.
    YP_003141127.1. NC_013162.1.

    3D structure databases

    ProteinModelPortali C7M3Y1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 521097.Coch_1011.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU92566 ; ACU92566 ; Coch_1011 .
    GeneIDi 8367431.
    KEGGi coc:Coch_1011.
    PATRICi 21270762. VBICapOch61160_0992.

    Phylogenomic databases

    eggNOGi COG3250.
    HOGENOMi HOG000252443.
    KOi K01190.
    OMAi FATNERY.
    OrthoDBi EOG6XWV0T.

    Enzyme and pathway databases

    BioCyci COCH521097:GH5D-1032-MONOMER.

    Family and domain databases

    Gene3Di 2.60.120.260. 1 hit.
    2.60.40.320. 2 hits.
    2.70.98.10. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR004199. B-gal_small/dom_5.
    IPR011013. Gal_mutarotase_SF_dom.
    IPR008979. Galactose-bd-like.
    IPR014718. Glyco_hydro-type_carb-bd_sub.
    IPR006101. Glyco_hydro_2.
    IPR013812. Glyco_hydro_2/20_Ig-like.
    IPR023230. Glyco_hydro_2_CS.
    IPR006102. Glyco_hydro_2_Ig-like.
    IPR006104. Glyco_hydro_2_N.
    IPR006103. Glyco_hydro_2_TIM.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02929. Bgal_small_N. 1 hit.
    PF00703. Glyco_hydro_2. 1 hit.
    PF02836. Glyco_hydro_2_C. 1 hit.
    PF02837. Glyco_hydro_2_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00132. GLHYDRLASE2.
    SMARTi SM01038. Bgal_small_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49303. SSF49303. 2 hits.
    SSF49785. SSF49785. 1 hit.
    SSF51445. SSF51445. 1 hit.
    SSF74650. SSF74650. 1 hit.
    PROSITEi PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

    Entry informationi

    Entry nameiC7M3Y1_CAPOD
    AccessioniPrimary (citable) accession number: C7M3Y1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3