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C7M3V5

- C7M3V5_CAPOD

UniProt

C7M3V5 - C7M3V5_CAPOD

Protein
Submitted name:

Alpha-amylase

Gene

Coch_0985

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciCOCH521097:GH5D-1005-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported (EC:3.2.1.1Imported)
    Gene namesi
    Ordered Locus Names:Coch_0985Imported
    OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
    Taxonomic identifieri521097 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
    ProteomesiUP000006650: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi521097.Coch_0985.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1449.
    HOGENOMiHOG000224113.
    KOiK07405.
    OMAiRFSNSEW.
    OrthoDBiEOG6F81Q4.

    Family and domain databases

    Gene3Di3.20.110.10. 1 hit.
    InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
    IPR027291. Glyco_hydro_38/57_N.
    IPR004300. Glyco_hydro_57_N.
    [Graphical view]
    PfamiPF03065. Glyco_hydro_57. 1 hit.
    [Graphical view]
    SUPFAMiSSF88713. SSF88713. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C7M3V5-1 [UniParc]FASTAAdd to Basket

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    MKKSICIYFQ IHHPERLRKY QFFDIGKKHN YFDNYANRSE LEDLAEHCYL    50
    PANTLLLELI NKYKGKFKVA FSITGSAIDQ LEMHTPEVIR SFQELAQTGS 100
    VEFLAETYSH SLASLSDDTD EFEQQVKRHT TAIKQLFGKK PVTFRNTSLI 150
    YSDTIGERVA KLGFKTMLTD GAKHVLGWKS PNFVYKNAID KNLNLLLKNS 200
    KLSDDIAIRF SDRNWSEYPL TSEKYISWVK NSLQDSEVLN LFMNYEVIGY 250
    YNNAQSGIFD FLRYFITYMM EDDNYEFLLP KEVAKKHPAK DVLPVPYPIS 300
    WTDEERDTTS WLGNELQKEA FRELFKIQPE VRKKKNADLI DDYTRLQASE 350
    HFYFMRTKLF SGADYHKYRL PYDSPYEAFI NYMNVLSDFI ERCKPHEQEE 400
    VQSTQVTKKK NQTRKK 416
    Length:416
    Mass (Da):49,067
    Last modified:October 13, 2009 - v1
    Checksum:iA42A3C3119CB62C4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU92540.1.
    RefSeqiWP_015782204.1. NC_013162.1.
    YP_003141101.1. NC_013162.1.

    Genome annotation databases

    EnsemblBacteriaiACU92540; ACU92540; Coch_0985.
    GeneIDi8367404.
    KEGGicoc:Coch_0985.
    PATRICi21270704. VBICapOch61160_0964.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001632 Genomic DNA. Translation: ACU92540.1 .
    RefSeqi WP_015782204.1. NC_013162.1.
    YP_003141101.1. NC_013162.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 521097.Coch_0985.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU92540 ; ACU92540 ; Coch_0985 .
    GeneIDi 8367404.
    KEGGi coc:Coch_0985.
    PATRICi 21270704. VBICapOch61160_0964.

    Phylogenomic databases

    eggNOGi COG1449.
    HOGENOMi HOG000224113.
    KOi K07405.
    OMAi RFSNSEW.
    OrthoDBi EOG6F81Q4.

    Enzyme and pathway databases

    BioCyci COCH521097:GH5D-1005-MONOMER.

    Family and domain databases

    Gene3Di 3.20.110.10. 1 hit.
    InterProi IPR011330. Glyco_hydro/deAcase_b/a-brl.
    IPR027291. Glyco_hydro_38/57_N.
    IPR004300. Glyco_hydro_57_N.
    [Graphical view ]
    Pfami PF03065. Glyco_hydro_57. 1 hit.
    [Graphical view ]
    SUPFAMi SSF88713. SSF88713. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

    Entry informationi

    Entry nameiC7M3V5_CAPOD
    AccessioniPrimary (citable) accession number: C7M3V5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3