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C7M3V5

- C7M3V5_CAPOD

UniProt

C7M3V5 - C7M3V5_CAPOD

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Protein
Submitted name:

Alpha-amylase

Gene

Coch_0985

Organism
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciCOCH521097:GH5D-1005-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:Coch_0985Imported
OrganismiCapnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) (Bacteroides ochraceus)Imported
Taxonomic identifieri521097 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeCapnocytophaga
ProteomesiUP000006650: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521097.Coch_0985.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiRFSNSEW.
OrthoDBiEOG6F81Q4.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

C7M3V5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MKKSICIYFQ IHHPERLRKY QFFDIGKKHN YFDNYANRSE LEDLAEHCYL
60 70 80 90 100
PANTLLLELI NKYKGKFKVA FSITGSAIDQ LEMHTPEVIR SFQELAQTGS
110 120 130 140 150
VEFLAETYSH SLASLSDDTD EFEQQVKRHT TAIKQLFGKK PVTFRNTSLI
160 170 180 190 200
YSDTIGERVA KLGFKTMLTD GAKHVLGWKS PNFVYKNAID KNLNLLLKNS
210 220 230 240 250
KLSDDIAIRF SDRNWSEYPL TSEKYISWVK NSLQDSEVLN LFMNYEVIGY
260 270 280 290 300
YNNAQSGIFD FLRYFITYMM EDDNYEFLLP KEVAKKHPAK DVLPVPYPIS
310 320 330 340 350
WTDEERDTTS WLGNELQKEA FRELFKIQPE VRKKKNADLI DDYTRLQASE
360 370 380 390 400
HFYFMRTKLF SGADYHKYRL PYDSPYEAFI NYMNVLSDFI ERCKPHEQEE
410
VQSTQVTKKK NQTRKK
Length:416
Mass (Da):49,067
Last modified:October 13, 2009 - v1
Checksum:iA42A3C3119CB62C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU92540.1.
RefSeqiYP_003141101.1. NC_013162.1.

Genome annotation databases

EnsemblBacteriaiACU92540; ACU92540; Coch_0985.
GeneIDi8367404.
KEGGicoc:Coch_0985.
PATRICi21270704. VBICapOch61160_0964.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001632 Genomic DNA. Translation: ACU92540.1 .
RefSeqi YP_003141101.1. NC_013162.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 521097.Coch_0985.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU92540 ; ACU92540 ; Coch_0985 .
GeneIDi 8367404.
KEGGi coc:Coch_0985.
PATRICi 21270704. VBICapOch61160_0964.

Phylogenomic databases

eggNOGi COG1449.
HOGENOMi HOG000224113.
KOi K07405.
OMAi RFSNSEW.
OrthoDBi EOG6F81Q4.

Enzyme and pathway databases

BioCyci COCH521097:GH5D-1005-MONOMER.

Family and domain databases

Gene3Di 3.20.110.10. 1 hit.
InterProi IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view ]
Pfami PF03065. Glyco_hydro_57. 1 hit.
[Graphical view ]
SUPFAMi SSF88713. SSF88713. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845Imported.

Entry informationi

Entry nameiC7M3V5_CAPOD
AccessioniPrimary (citable) accession number: C7M3V5
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3