C7M316 (C7M316_ACIFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445

Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445

Gene names

Name:	gcp HAMAP MF_01445
Ordered Locus Names:	Afer_0442

Organism

Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) [Complete proteome] [HAMAP]

Taxonomic identifier

525909 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Acidimicrobidae › Acidimicrobiales › Acidimicrobineae › Acidimicrobiaceae › Acidimicrobium

Protein attributes

Sequence length	347 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445
Subcellular location	Cytoplasm By similarity HAMAP MF_01445.
Sequence similarities	Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
Biological process	tRNA processing HAMAP MF_01445
Cellular component	Cytoplasm HAMAP MF_01445
Molecular function	Hydrolase Protease EMBL ACU53410.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	proteolysis Inferred from electronic annotation. Source: UniProtKB-KW threonylcarbamoyladenosine biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	cobalamin binding Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: InterPro metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7M316 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 380708A873251EAF	FASTA	347	35,381
	10 20 30 40 50 60 MTSARSLDRL ELVDAGVVLA IETSCDDTAV AVVAGGRVAA NVVRSQAALH APFGGVVPEV 70 80 90 100 110 120 AARAHDAAMV EVVEEALAES GIDAHEVEAI AVTKGPGLPG SLVVGVGAAL GLAVGLDRPL 130 140 150 160 170 180 IGVDHMEGHL YAATIEGPVA LPALSLLVSG GHSELVVIEA PFRYRLLGRT RDDAAGEAFD 190 200 210 220 230 240 KVARILGLGF PGGPAIEAAA RDGRPDAIRF ARALRNQGFD LSFSGIKTEV ARYLEGARAA 250 260 270 280 290 300 EVADVAASFQ EAVVDVLVAK LERALESERV ETVVIGGGVA ANGPLRERVA ELARARGVGA 310 320 330 340 HIPARSLCAD NAAMIAAAGA ARLVAGEHAV DGLDIEPTRS LVGGDDH

References

[1]

"Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP)." Clum A., Nolan M., Lang E., Glavina Del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. , Goeker M., Spring S., Land M., Hauser L., Chang Y.-J., Jeffries C.C., Chain P., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.-P., Lapidus A. Stand. Genomic Sci. 1:38-45(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10331 / JCM 15462 / NBRC 103882 / ICP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001631 Genomic DNA. Translation: ACU53410.1.
RefSeq	YP_003109083.1. NC_013124.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C7M316.
Protein family/group databases
MEROPS	M22.A01.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8322501.
GenomeReviews	Gene locus Afer_0442 in contig CP001631_GR.
KEGG	afo:Afer_0442.
PATRIC	20640505. VBIAciFer34262_0462.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	PAVGVHH.
Family and domain databases
HAMAP	MF_01445. gcp. [Tree]
InterPro	IPR006158. Cobalamin-bd. IPR022450. Pept_M22_O-sialoglycopept. IPR000905. Peptidase_M22. IPR017861. Peptidase_M22_subgr. [Graphical view]
Gene3D	G3DSA:3.40.50.280. B12_bd. 1 hit.
KO	K01409.
Pfam	PF00814. Peptidase_M22. 1 hit. [Graphical view]
PRINTS	PR00789. OSIALOPTASE.
TIGRFAMs	TIGR03723. Bact_gcp. 1 hit. TIGR00329. Gcp_kae1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7M316_ACIFD

Accession

Primary (citable) accession number: C7M316

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)