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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Afer_0119

Organism
Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciAFER525909:GHMR-126-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Afer_0119Imported
OrganismiAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)Imported
Taxonomic identifieri525909 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaAcidimicrobidaeAcidimicrobialesAcidimicrobineaeAcidimicrobiaceaeAcidimicrobium
ProteomesiUP000000771: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi525909.Afer_0119.

Structurei

3D structure databases

ProteinModelPortaliC7M1Z0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMVSINSI.
OrthoDBiEOG6ZKXMS.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7M1Z0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAGNRYEAGV KEYRKTYWAP DYVPLDSDLL AVFKIVPQPG VDREEAAAAV
60 70 80 90 100
AAESSTGTWT TVWTDLLTDL DYYKGRAYRI EDVPGDDTAF YAFVAYPIDL
110 120 130 140 150
FEEGSVVNVF TSLVGNVFGF KAVRSLRLED VRFPLAFVNT CNGPPHGIQV
160 170 180 190 200
ERDKMNKYGR PLLGCTIKPK LGLSAKNYGR AVYEVLRGGL DFTKDDENVN
210 220 230 240 250
SQPFMRWRDR FLFVAEAIHQ AEAETGERKG HYLNVTAPSP EEMYERAEFA
260 270 280 290 300
KELGMPIIMH DFLTGGFTAN TGLARWCRRN GMLLHIHRAM HAVIDRNPYH
310 320 330 340 350
GIHFRVLAKA LRLSGGDHLH TGTVVGKLEG DRAATQGWVD LLRESYIPED
360 370 380 390 400
RSRGIFFDQD WGSMPGVFAV ASGGIHVWHM PSLLTIFGDD AVFQFGGGTL
410 420 430 440 450
GHPWGNAPGA TANRVALEAC VQARNEGRDV EREGKDILQN AAKHSPELRV
460 470
AMETWKEIKF EFDTVDKLDS VHR
Length:473
Mass (Da):52,903
Last modified:October 13, 2009 - v1
Checksum:i1EE3DB0841FA345C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001631 Genomic DNA. Translation: ACU53088.1.
RefSeqiYP_003108761.1. NC_013124.1.

Genome annotation databases

EnsemblBacteriaiACU53088; ACU53088; Afer_0119.
GeneIDi8322172.
KEGGiafo:Afer_0119.
PATRICi20639821. VBIAciFer34262_0126.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001631 Genomic DNA. Translation: ACU53088.1.
RefSeqiYP_003108761.1. NC_013124.1.

3D structure databases

ProteinModelPortaliC7M1Z0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi525909.Afer_0119.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU53088; ACU53088; Afer_0119.
GeneIDi8322172.
KEGGiafo:Afer_0119.
PATRICi20639821. VBIAciFer34262_0126.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMVSINSI.
OrthoDBiEOG6ZKXMS.

Enzyme and pathway databases

BioCyciAFER525909:GHMR-126-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 10331 / JCM 15462 / NBRC 103882 / ICPImported.

Entry informationi

Entry nameiC7M1Z0_ACIFD
AccessioniPrimary (citable) accession number: C7M1Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.