C7M1V0 (C7M1V0_ACIFD) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 24.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Phosphoribosylformylglycinamidine cyclo-ligase RuleBase RU004370 EC=6.3.3.1 RuleBase RU004370 | ||
| Gene names |
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| Organism | Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 525909 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Acidimicrobidae › Acidimicrobiales › Acidimicrobineae › Acidimicrobiaceae › Acidimicrobium |
Protein attributes
| Sequence length | 342 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine = ADP + phosphate + 5-amino-1-(5-phospho-D-ribosyl)imidazole. RuleBase RU004370 SAAS SAAS004733 |
| Pathway | Purine metabolism; IMP biosynthesis via de novo pathway; 5-amino-1-(5-phospho-D-ribosyl)imidazole from N(2)-formyl-N(1)-(5-phospho-D-ribosyl)glycinamide: step 2/2. RuleBase RU004371 SAAS SAAS004733 |
| Subcellular location | Cytoplasm By similarity SAAS SAAS004733. |
| Sequence similarities | Belongs to the AIR synthase family. RuleBase RU004370 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Purine biosynthesis SAAS SAAS004733 |
| Cellular component | Cytoplasm SAAS SAAS004733 |
| Ligand | ATP-binding SAAS SAAS004733 Nucleotide-binding |
| Molecular function | Ligase RuleBase RU004370 SAAS SAAS004733 EMBL ACU54847.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | 'de novo' IMP biosynthetic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW phosphoribosylformylglycinamidine cyclo-ligase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP)." Clum A., Nolan M., Lang E., Glavina Del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. Lapidus A.Stand. Genomic Sci. 1:38-45(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10331 / JCM 15462 / NBRC 103882 / ICP. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001631 Genomic DNA. Translation: ACU54847.1. |
| RefSeq | YP_003110520.1. NC_013124.1. |
3D structure databases | |
| ProteinModelPortal | C7M1V0. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C7M1V0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 8324043. |
| GenomeReviews | Gene locus Afer_1943 in contig CP001631_GR. |
| KEGG | afo:Afer_1943. |
| PATRIC | 20643763. VBIAciFer34262_2054. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | PENIPRV. |
Family and domain databases | |
| InterPro | IPR000728. AIR_synth. IPR010918. AIR_synth_C. IPR004733. PurM_cligase. IPR016188. PurM_N-like. [Graphical view] |
| KO | K01933. |
| Pfam | PF00586. AIRS. 1 hit. PF02769. AIRS_C. 1 hit. [Graphical view] |
| SUPFAM | SSF56042. AIR_synth_C. 1 hit. SSF55326. PurM_N-like. 1 hit. |
| TIGRFAMs | TIGR00878. PurM. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | C7M1V0_ACIFD | ||||||||
| Accession | Primary (citable) accession number: C7M1V0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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