C7M110 (C7M110_ACIFD) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 19.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Glutamate racemase HAMAP MF_00258 EC=5.1.1.3 HAMAP MF_00258 | ||||
| Gene names |
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| Organism | Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 525909 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Acidimicrobidae › Acidimicrobiales › Acidimicrobineae › Acidimicrobiaceae › Acidimicrobium |
Protein attributes
| Sequence length | 276 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942 |
| Catalytic activity | L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942 |
| Pathway | Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942 |
| Sequence similarities | Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell shape Cell wall biogenesis/degradation HAMAP MF_00258 SAAS SAAS015942 Peptidoglycan synthesis HAMAP MF_00258 SAAS SAAS015942 |
| Molecular function | Isomerase HAMAP MF_00258 SAAS SAAS015942 EMBL ACU54668.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic processInferred from electronic annotation. Source: HAMAP regulation of cell shapeInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | glutamate racemase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP)." Clum A., Nolan M., Lang E., Glavina Del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. Lapidus A.Stand. Genomic Sci. 1:38-45(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10331 / JCM 15462 / NBRC 103882 / ICP. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001631 Genomic DNA. Translation: ACU54668.1. |
| RefSeq | YP_003110341.1. NC_013124.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C7M110. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 8323844. |
| GenomeReviews | Gene locus Afer_1752 in contig CP001631_GR. |
| KEGG | afo:Afer_1752. |
| PATRIC | 20643347. VBIAciFer34262_1853. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | PQEDTIY. |
Family and domain databases | |
| HAMAP | MF_00258. Glu_racemase. [Tree] |
| InterPro | IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1860. Asp/Glu_race. 2 hits. |
| KO | K01776. |
| PANTHER | PTHR21198. PTHR21198. 1 hit. |
| Pfam | PF01177. Asp_Glu_race. 1 hit. [Graphical view] |
| SUPFAM | SSF53681. Asp/Glu_race. 2 hits. |
| TIGRFAMs | TIGR00067. Glut_race. 1 hit. |
| PROSITE | PS00923. ASP_GLU_RACEMASE_1. 1 hit. PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C7M110_ACIFD | ||||||||
| Accession | Primary (citable) accession number: C7M110 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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