C7M0B3 (C7M0B3_ACIFD) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 23.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: tRNA (guanine-N(1)-)-methyltransferase RuleBase RU003464 EC=2.1.1.31 RuleBase RU003464 | ||
| Gene names |
| ||
| Organism | Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) [Complete proteome] [HAMAP] | ||
| Taxonomic identifier | 525909 [NCBI] | ||
| Taxonomic lineage | Bacteria › Actinobacteria › Acidimicrobidae › Acidimicrobiales › Acidimicrobineae › Acidimicrobiaceae › Acidimicrobium |
Protein attributes
| Sequence length | 255 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Specifically methylates guanosine-37 in various tRNAs By similarity. RuleBase RU003464 |
| Catalytic activity | S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N(1)-methylguanine. RuleBase RU003464 |
| Subunit structure | Homodimer By similarity. RuleBase RU003464 |
| Subcellular location | Cytoplasm By similarity RuleBase RU003464. |
| Sequence similarities | Belongs to the RNA methyltransferase TrmD family. RuleBase RU003464 |
Ontologies
| Keywords | |
|---|---|
| Biological process | tRNA processing RuleBase RU003464 |
| Cellular component | Cytoplasm RuleBase RU003464 |
| Ligand | S-adenosyl-L-methionine RuleBase RU003464 |
| Molecular function | Methyltransferase RuleBase RU003464 EMBL ACU54421.1 Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | RNA binding Inferred from electronic annotation. Source: InterPro tRNA (guanine-N1-)-methyltransferase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequences
| ||||||||||||||||||
References
| [1] | "Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP)." Clum A., Nolan M., Lang E., Glavina Del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K. Lapidus A.Stand. Genomic Sci. 1:38-45(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10331 / JCM 15462 / NBRC 103882 / ICP. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001631 Genomic DNA. Translation: ACU54421.1. |
| RefSeq | YP_003110094.1. NC_013124.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C7M0B3. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 8323582. |
| GenomeReviews | Gene locus Afer_1498 in contig CP001631_GR. |
| KEGG | afo:Afer_1498. |
| PATRIC | 20642787. VBIAciFer34262_1580. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | VCGRFEG. |
Family and domain databases | |
| HAMAP | MF_00605. TrmD. [Tree] |
| InterPro | IPR016009. tRNA_m1G_MeTrfase. IPR002649. tRNA_m1G_MeTrfase_bac. IPR023148. tRNA_m1G_MeTrfase_C. [Graphical view] |
| Gene3D | G3DSA:1.10.1270.20. tRNA_m1G_MeTrfase_C. 1 hit. |
| KO | K00554. |
| PANTHER | PTHR10056. PTHR10056. 1 hit. |
| Pfam | PF01746. tRNA_m1G_MT. 1 hit. [Graphical view] |
| PIRSF | PIRSF000386. tRNA_mtase. 1 hit. |
| TIGRFAMs | TIGR00088. TrmD. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | C7M0B3_ACIFD | ||||||||
| Accession | Primary (citable) accession number: C7M0B3 | ||||||||
| Entry history |
| ||||||||
| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with