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Protein
Submitted name:

Aminotransferase class-III

Gene

Afer_0700

Organism
Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciAFER525909:GHMR-710-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aminotransferase class-IIIImported
Gene namesi
Ordered Locus Names:Afer_0700Imported
OrganismiAcidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP)Imported
Taxonomic identifieri525909 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaAcidimicrobidaeAcidimicrobialesAcidimicrobineaeAcidimicrobiaceaeAcidimicrobium
ProteomesiUP000000771 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi525909.Afer_0700.

Structurei

3D structure databases

ProteinModelPortaliC7LY42.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiDMATEQS.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7LY42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRLAPVWSK VSPITVTHGR GARVWDTNGQ AWLDMTAGIA VTSTGHAHPK
60 70 80 90 100
VAEAIARQAE RFIHAQVNIY THDLLQPLAD ALDAITPDGI DTFFFSNSGA
110 120 130 140 150
EATEAAVKLA RQATKRPNVI VFQGSFHGRT AQAMAMTTSR TGYRAGYMPL
160 170 180 190 200
PAGVFVSLFP GFPRSSRVGD EVSVDEALDY LDYLLASQTA PAETAAVVIE
210 220 230 240 250
PVLGEGGYIP APAAFLTGVV ERARAHGIVF VADEVQTGFG RTGRMFAVEH
260 270 280 290 300
ANVTPDILVM AKGIASGFPF SGIGASWELM ERWPVGSHGG TYGGNPMGVA
310 320 330 340 350
AALATIQVIQ EEGLVDNAAR RGAQLQASME RIAEKFECVS RVRGLGLMVG
360 370 380 390 400
VELRDDAGRP DADLVGRVLA EMQASHRVLA MSAGTFGNII RWMPPLVVSE
410 420
AEIDEAAAAF EASLAHVLAQ R
Length:421
Mass (Da):44,675
Last modified:October 13, 2009 - v1
Checksum:iF58D7F552722796F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001631 Genomic DNA. Translation: ACU53650.1.
RefSeqiYP_003109323.1. NC_013124.1.

Genome annotation databases

EnsemblBacteriaiACU53650; ACU53650; Afer_0700.
KEGGiafo:Afer_0700.
PATRICi20641053. VBIAciFer34262_0735.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001631 Genomic DNA. Translation: ACU53650.1.
RefSeqiYP_003109323.1. NC_013124.1.

3D structure databases

ProteinModelPortaliC7LY42.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi525909.Afer_0700.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU53650; ACU53650; Afer_0700.
KEGGiafo:Afer_0700.
PATRICi20641053. VBIAciFer34262_0735.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiDMATEQS.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciAFER525909:GHMR-710-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 10331 / JCM 15462 / NBRC 103882 / ICPImported.

Entry informationi

Entry nameiC7LY42_ACIFD
AccessioniPrimary (citable) accession number: C7LY42
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: April 1, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.