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Protein

30S ribosomal protein S7

Gene

rpsG

Organism
Brucella microti (strain CCM 4915)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
  3. tRNA binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotation

Keywords - Ligandi

RNA-binding, rRNA-bindingUniRule annotation, tRNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciBMIC568815:GJUE-1245-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S7UniRule annotation
Gene namesi
Name:rpsGUniRule annotationImported
Ordered Locus Names:BMI_I1248Imported
OrganismiBrucella microti (strain CCM 4915)Imported
Taxonomic identifieri568815 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000002188: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiC7LCI7.

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S9 and S11.UniRule annotation

Protein-protein interaction databases

STRINGi568815.BMI_I1248.

Structurei

3D structure databases

ProteinModelPortaliC7LCI7.
SMRiC7LCI7. Positions 3-152.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S7P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0049.
HOGENOMiHOG000039067.
KOiK02992.
OMAiCKPLVEV.
OrthoDBiEOG6P5ZKW.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7LCI7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRRHKAEKR EINPDPKFGD LVITKFMNAV MLHGKKSVAE SIVYGALDAI
60 70 80 90 100
EAKAKSEPVA LFHQALDNVA PHIEVRSRRV GGATYQVPVD VRPERRQALA
110 120 130 140 150
IRWLINAARG RNETTMVDRL SGELLDAANN RGSAVKKRED THRMAEANRA

FSHYRW
Length:156
Mass (Da):17,625
Last modified:October 13, 2009 - v1
Checksum:iFBB03B11C5DF720C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001578 Genomic DNA. Translation: ACU48222.1.
RefSeqiYP_003107171.1. NC_013119.1.

Genome annotation databases

EnsemblBacteriaiACU48222; ACU48222; BMI_I1248.
GeneIDi8320809.
KEGGibmr:BMI_I1248.
PATRICi17807510. VBIBruMic92249_2462.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001578 Genomic DNA. Translation: ACU48222.1.
RefSeqiYP_003107171.1. NC_013119.1.

3D structure databases

ProteinModelPortaliC7LCI7.
SMRiC7LCI7. Positions 3-152.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi568815.BMI_I1248.

Proteomic databases

PRIDEiC7LCI7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU48222; ACU48222; BMI_I1248.
GeneIDi8320809.
KEGGibmr:BMI_I1248.
PATRICi17807510. VBIBruMic92249_2462.

Phylogenomic databases

eggNOGiCOG0049.
HOGENOMiHOG000039067.
KOiK02992.
OMAiCKPLVEV.
OrthoDBiEOG6P5ZKW.

Enzyme and pathway databases

BioCyciBMIC568815:GJUE-1245-MONOMER.

Family and domain databases

Gene3Di1.10.455.10. 1 hit.
HAMAPiMF_00480_B. Ribosomal_S7_B.
InterProiIPR000235. Ribosomal_S5/S7.
IPR005717. Ribosomal_S7_bac/org-type.
IPR020606. Ribosomal_S7_CS.
IPR023798. Ribosomal_S7_dom.
[Graphical view]
PANTHERiPTHR11205. PTHR11205. 1 hit.
PfamiPF00177. Ribosomal_S7. 1 hit.
[Graphical view]
PIRSFiPIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAMiSSF47973. SSF47973. 1 hit.
TIGRFAMsiTIGR01029. rpsG_bact. 1 hit.
PROSITEiPS00052. RIBOSOMAL_S7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Brucella microti: the genome sequence of an emerging pathogen."
    Audic S., Lescot M., Claverie J.-M., Scholz H.C.
    BMC Genomics 10:352-352(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCM 4915Imported.

Entry informationi

Entry nameiC7LCI7_BRUMC
AccessioniPrimary (citable) accession number: C7LCI7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 7, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.