C7JG34 (C7JG34_ACEP3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
D-amino acid dehydrogenase small subunit HAMAP MF_01202
EC=1.4.99.1 HAMAP MF_01202

Gene names

Name:	dadA HAMAP MF_01202
Ordered Locus Names:	APA01_24980

Organism

Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) [Complete proteome] [HAMAP]

Taxonomic identifier

634452 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Acetobacteraceae › Acetobacter

Protein attributes

Sequence length	419 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Oxidative deamination of D-amino acids By similarity. HAMAP MF_01202 SAAS SAAS023080
Catalytic activity	A D-amino acid + H2O + acceptor = a 2-oxo acid + NH3 + reduced acceptor. HAMAP MF_01202 SAAS SAAS023080
Cofactor	FAD By similarity. HAMAP MF_01202 SAAS SAAS023080
Pathway	Amino-acid degradation; D-alanine degradation; NH(3) and pyruvate from D-alanine: step 1/1. HAMAP MF_01202
Subunit structure	Heterodimer of a small and a large subunit By similarity. HAMAP MF_01202 SAAS SAAS023080
Sequence similarities	Belongs to the DadA oxidoreductase family. HAMAP MF_01202

Ontologies

Keywords
Ligand	FAD HAMAP MF_01202 SAAS SAAS023080 Flavoprotein HAMAP MF_01202 SAAS SAAS023080
Molecular function	Oxidoreductase HAMAP MF_01202 SAAS SAAS023080
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	alanine catabolic process Inferred from electronic annotation. Source: HAMAP
Molecular function	D-amino-acid dehydrogenase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	3 – 17	15	FAD By similarity HAMAP MF_01202

Sequences

	Sequence		Length	Mass (Da)
	C7JG34 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 43F25BF662C16985	FASTA	419	45,906
	10 20 30 40 50 60 MKILVLGSGV VGVTSAWYLA KAGHEVTVVD RQPEAGMETS FANAGQVSPG YSAPWAGPGV 70 80 90 100 110 120 PLKSISWLLM KYRPFVFWPM PDPHLWKWLF QMLENCTAAA YDRNKGRMVR LAEYSRDVMQ 130 140 150 160 170 180 DLRATTGITY DDRQQGTLQV FRTQKQLDAT AKDIAVLKQY NVPYELLDVD GCVTAEPGLA 190 200 210 220 230 240 ASRHKIVGGL RLPGDETGDA FKFTQRLASM AQEAGVKFLY DTVVRRIRSE SGRVTGVETS 250 260 270 280 290 300 RGVLTADSYV LSLGSFSPAL LRPLGIDLPV YPVKGYSLTA SIQNADAAPV STIMDETFKI 310 320 330 340 350 360 GITRLGDRVR IGGTAELAGF SRRLRKPRRE TLEHSVTDLF PGCCDVGQAL FWTGLRPMTP 370 380 390 400 410 DGTPVIGRTG LDNLFLNTGH GTLGWTMACG SGKVLADLMS NKKPDIDTAD LNIFRYRQS

References

[1]

"Whole-genome analyses reveal genetic instability of Acetobacter pasteurianus." Azuma Y., Hosoyama A., Matsutani M., Furuya N., Horikawa H., Harada T., Hirakawa H., Kuhara S., Matsushita K., Fujita N., Shirai M. Nucleic Acids Res. 37:5768-5783(2009) [PubMed: 19638423] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP011121 Genomic DNA. Translation: BAI00604.1.
RefSeq	YP_003188983.1. NC_013209.1.
3D structure databases
ProteinModelPortal	C7JG34.
ModBase	Search...
Protein-protein interaction databases
STRING	C7JG34.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8436344.
GenomeReviews	Gene locus APA01_24980 in contig AP011121_GR.
KEGG	apt:APA01_24980.
PATRIC	20635494. VBIAcePas139226_2578.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	VDRQPAV.
ProtClustDB	CLSK2403145.
Family and domain databases
HAMAP	MF_01202. DadA. [Tree]
InterPro	IPR023080. D-aa_DH_ssu_DadA. IPR006076. FAD-dep_OxRdtase. [Graphical view]
KO	K00285.
Pfam	PF01266. DAO. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7JG34_ACEP3

Accession

Primary (citable) accession number: C7JG34

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)