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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Thermoanaerobacter ethanolicus CCSD1
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotation
ORF Names:TeCCSD1DRAFT_2056Imported
OrganismiThermoanaerobacter ethanolicus CCSD1Imported
Taxonomic identifieri589861 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeThermoanaerobacter
Proteomesi
  • UP000005690 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliC7IUU5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

C7IUU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSYMAKPEE VKRKWFVIDA EGKVLGRLAS QIAKILMGKH KPTYTPHVDT
60 70 80 90 100
GDFVIVLNAE KIVLTGNKLE DKYYKYYTGY PGGLKEVQYK KLMQTKPEFV
110 120 130 140
IYHAVKGMLP KNRLGRRMIK RLKVYRGSEH KHQAQKPEKL DIE
Length:143
Mass (Da):16,668
Last modified:October 13, 2009 - v1
Checksum:iB73E68E903C62AFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACXY01000035 Genomic DNA. Translation: EEU61538.1.
RefSeqiWP_003868593.1. NZ_ACXY01000035.1.

Genome annotation databases

EnsemblBacteriaiEEU61538; EEU61538; TeCCSD1DRAFT_2056.

Similar proteinsi

Entry informationi

Entry nameiC7IUU5_THEET
AccessioniPrimary (citable) accession number: C7IUU5
Entry historyiIntegrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: September 27, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported