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Protein
Submitted name:

Methylobacterium extorquens DM4 str. DM4 chromosome, complete genome

Gene

METDI3487

Organism
Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium dichloromethanicum (strain DM4))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciMEXT661410:GJA1-3414-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methylobacterium extorquens DM4 str. DM4 chromosome, complete genomeImported
Gene namesi
Ordered Locus Names:METDI3487Imported
OrganismiMethylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium dichloromethanicum (strain DM4))Imported
Taxonomic identifieri661410 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesMethylobacteriaceaeMethylobacterium
ProteomesiUP000008070 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiGTRIIFT.
OrthoDBiEOG6RVFV2.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.

Sequencei

Sequence statusi: Complete.

C7C8I9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIAREDRHP ITDIMRQTPE IPEGCQWAIF LRNHDELTLE MVTAEERDYL
60 70 80 90 100
WSFYAAERRA RINLGIRRRL APLLENDRRK IELMKSLVLS MPGTPVLYYG
110 120 130 140 150
DEIGMGDNIY LGDRDGVRTP MQWSPDRNGG FSRATPQKLF LPSIQDPIYG
160 170 180 190 200
YDAINVEAQI QAQTSLLNWT RRMIAIRNNS VALGRGAIQF LYPANRKVLA
210 220 230 240 250
WIREHENERI LCVANLSRAP QAVQLDLSDL RGAIPIELTG GTAFPAIGEL
260 270 280 290 300
PYLLTLPAYG FYWFALSVAN TGEIGPQPQS PELFTLVLTG GIETLIKGRE
310 320 330 340 350
RTAFERTVAP PFIASRRWFG AKGTRIKSVQ VDDSAIVKDG SGEGKFLLPR
360 370 380 390 400
VAVTLANGER QDYFVPLAVE EGREDETLLD HAVARVRRGP RTGLLYEAAA
410 420 430 440 450
AAPFAVALIE AMRDGVTIPS ERGSLVFSTT SAYDPEVPFE AADVRRLSAE
460 470 480 490 500
QSNTSIAIGA RMMLKLLRRL QPGTHPEIEI GRFLTEQAHF ANTPALLGVV
510 520 530 540 550
EHVAADGTRT ALALLQKFVL NQGDAWTLML EGLRRDFETV VLAPESEAPA
560 570 580 590 600
PEDAFNAHLR WAELLGQRTA ELHRAFAIDT DDPAFAVEPF DEADLASLAD
610 620 630 640 650
DARHQAARAF KGLDAITAWS PGSASEALAS RRSEVEALVT DLASGPLRGA
660 670 680 690 700
TKTRIHGDYH LGQVLASEGD LIIVDFEGEP SRPVEQRRAK STPMRDVAGM
710 720 730 740 750
LRSFAYGAET VVREITARFG DSEERARNAA IAWRGMIDAA FLDGYGQAVA
760 770 780 790 800
GSRAAVEDAE TQSRLLRLSL LTKALYEVDY EVNNRPDWIE IPARGVLNIL
810
DEAKRDRASV
Length:810
Mass (Da):89,486
Last modified:September 22, 2009 - v1
Checksum:iC8808D1E8D41561B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP103042 Genomic DNA. Translation: CAX25130.1.
RefSeqiWP_015823061.1. NC_012988.1.
YP_003068981.1. NC_012988.1.

Genome annotation databases

EnsemblBacteriaiCAX25130; CAX25130; METDI3487.
KEGGimdi:METDI3487.
PATRICi22525500. VBIMetExt143287_3272.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP103042 Genomic DNA. Translation: CAX25130.1.
RefSeqiWP_015823061.1. NC_012988.1.
YP_003068981.1. NC_012988.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAX25130; CAX25130; METDI3487.
KEGGimdi:METDI3487.
PATRICi22525500. VBIMetExt143287_3272.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000268420.
KOiK05343.
OMAiGTRIIFT.
OrthoDBiEOG6RVFV2.

Enzyme and pathway databases

BioCyciMEXT661410:GJA1-3414-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 3 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 5838 / DM4Imported.

Entry informationi

Entry nameiC7C8I9_METED
AccessioniPrimary (citable) accession number: C7C8I9
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: June 24, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.