C7BYY8 (C7BYY8_HELPB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL CAX29451.1
EC=5.1.1.1 EMBL CAX29451.1

Gene names

Name:	alr EMBL CAX29451.1
Ordered Locus Names:	HELPY_0927 EMBL CAX29451.1

Organism

Helicobacter pylori (strain B38) [Complete proteome] [HAMAP] EMBL CAX29451.1

Taxonomic identifier

592205 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter › Helicobacter pylori

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL CAX29451.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7BYY8 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: C9C7127EE08697D6	FASTA	377	41,920
	10 20 30 40 50 60 MLKRASFVEV DTASLRHNFS AVKSIIPKDA CVMAVVKANA YGVGAIKASE IFLQEGANYL 70 80 90 100 110 120 GVAALDEALE LRSYFSKTPI LILGYSPNSN ASMLIDNDLS AMVFSFEQAE VFSQMALKSQ 130 140 150 160 170 180 KRLKVHLKID TGMHRLGLEP NFKSIEIIKK IRALKGLEVE GIFTHLSNAD AKIKTHAKNQ 190 200 210 220 230 240 MKAFNAFLEQ LLDQKIEFQY RHAYNSAGIL SLCNGNENRF LNLYRPGIML YGFYPSNEMK 250 260 270 280 290 300 ESCPTILKNV VSLKAQIVQI RSVKKGEFIG YGEHFYTNEE TLVGVLALGY ADGLVRALGN 310 320 330 340 350 360 RIQVAINNQL APLIGKVCMD QCFVKLNDIQ AKEGDEVILF GDKSTKANDA SEIAVLLNTI 370 PYETISTLSK RLERVYI

References

[1]

"From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma." Thiberge J.M., Boursaux-Eude C., Lehours P., Dillies M.A., Creno S., Coppee J.Y., Rouy Z., Lajus A., Ma L., Burucoa C., Ruskone-Foumestraux A., Courillon-Mallet A., De Reuse H., Gomperts Boneca I., Lamarque D., Megraud F., Delchier J.C., Medigue C. , Bouchier C., Labigne A., Raymond J. BMC Genomics 11:368-368(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: B38 EMBL CAX29451.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM991728 Genomic DNA. Translation: CAX29451.1.
RefSeq	YP_003057645.1. NC_012973.1.
3D structure databases
ProteinModelPortal	C7BYY8.
ModBase	Search...
Protein-protein interaction databases
STRING	592205.HELPY_0927.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAX29451; CAX29451; HELPY_0927.
GeneID	8207992.
KEGG	hpb:HELPY_0927.
PATRIC	20596506. VBIHelPyl144313_0928.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	NFKSIEI.
ProtClustDB	CLSK496287.
Enzyme and pathway databases
BioCyc	HPYL592205:GJAG-909-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7BYY8_HELPB

Accession

Primary (citable) accession number: C7BYY8

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)