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C7BU50 (C7BU50_PHOAA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase J HAMAP-Rule MF_01523

EC=2.1.1.242 HAMAP-Rule MF_01523
Alternative name(s):
16S rRNA m2G1516 methyltransferase HAMAP-Rule MF_01523
rRNA (guanine-N(2)-)-methyltransferase HAMAP-Rule MF_01523
Gene names
Name:yhiQ EMBL CAQ82200.1
Synonyms:rsmJ HAMAP-Rule MF_01523
Ordered Locus Names:PAU_00107 EMBL CAQ82200.1
OrganismPhotorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) (Xenorhabdus luminescens (strain 2)) [Complete proteome] [HAMAP]
Taxonomic identifier553480 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePhotorhabdus

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Specifically methylates the guanosine in position 1516 of 16S rRNA By similarity. HAMAP-Rule MF_01523

Catalytic activity

S-adenosyl-L-methionine + guanine(1516) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1516) in 16S rRNA. HAMAP-Rule MF_01523 SAAS SAAS007536

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_01523 SAAS SAAS007536.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmJ family. HAMAP-Rule MF_01523

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region101 – 1022S-adenosyl-L-methionine binding By similarity HAMAP-Rule MF_01523
Region117 – 1182S-adenosyl-L-methionine binding By similarity HAMAP-Rule MF_01523
Region153 – 1542S-adenosyl-L-methionine binding By similarity HAMAP-Rule MF_01523

Sites

Binding site1711S-adenosyl-L-methionine By similarity HAMAP-Rule MF_01523

Sequences

Sequence LengthMass (Da)Tools
C7BU50 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 67E7FBDCCBCAD5AD

FASTA24727,021
        10         20         30         40         50         60 
MDICLICEQG ADSSALSQLA KRWHLIHDES AVMALVLTPQ HLELRKLDEP KLGGIYVDFV 

        70         80         90        100        110        120 
SGVMAHRRRF GGGRGEAVAK AVGIKKDYLP TVVDATAGLG RDAFVLASLG CHVRMLERHP 

       130        140        150        160        170        180 
VVAALLDDGL QRGYQDAEIG GWLQERMTLL HASSITALVD ITPQPDVVYL DPMYPHKQKS 

       190        200        210        220        230        240 
ALVKKEMRVF QSLVGADEDA NHLLAPARAL AKRRVVVKRP DYAEPLAGVA ASAAITTKNH 


RFDIYPC 

« Hide

References

[1]"Comparative genomics of the emerging human pathogen Photorhabdus asymbiotica with the insect pathogen Photorhabdus luminescens."
Wilkinson P., Waterfield N.R., Crossman L., Corton C., Sanchez-Contreras M., Vlisidou I., Barron A., Bignell A., Clark L., Ormond D., Mayho M., Bason N., Smith F., Simmonds M., Churcher C., Harris D., Thompson N.R., Quail M., Parkhill J., ffrench-Constant R.H.
BMC Genomics 10:302-302(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43949 / 3105-77.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FM162591 Genomic DNA. Translation: CAQ82200.1.
RefSeqYP_003038946.1. NC_012962.1.

3D structure databases

ProteinModelPortalC7BU50.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING291112.PAU_00107.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAQ82200; CAQ82200; PAU_00107.
GeneID13861470.
KEGGpay:PAU_00107.
PATRIC20493678. VBIPhoAsy71438_0133.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000218236.
KOK15984.
OMASSRYDIY.
OrthoDBEOG657J92.
ProtClustDBPRK10742.

Enzyme and pathway databases

BioCycPASY291112:GJQ0-113-MONOMER.

Family and domain databases

HAMAPMF_01523. 16SrRNA_methyltr_J.
InterProIPR007536. 16SrRNA_methylTrfase_J.
[Graphical view]
PfamPF04445. SAM_MT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7BU50_PHOAA
AccessionPrimary (citable) accession number: C7BU50
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: February 19, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)