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Protein

Ribulose bisphosphate carboxylase large chain

Gene

rbcL

Organism
Selaginella moellendorffii (Spikemoss)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotation

Cofactori

Mg2+UniRule annotationNote: Binds 1 Mg2+ ion per subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation, MonooxygenaseUniRule annotation, Oxidoreductase

Keywords - Biological processi

Calvin cycleUniRule annotation, Carbon dioxide fixationUniRule annotation, PhotorespirationUniRule annotation, PhotosynthesisUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase large chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Gene namesi
Name:rbcLImported
Encoded oniPlastidImported
OrganismiSelaginella moellendorffii (Spikemoss)Imported
Taxonomic identifieri88036 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaLycopodiidaeSelaginellalesSelaginellaceaeSelaginella
Proteomesi
  • UP000001514 Componenti: Plastid

Subcellular locationi

  • Plastidchloroplast UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

ChloroplastUniRule annotation, Plastid

Interactioni

Subunit structurei

Heterohexadecamer of 8 large chains and 8 small chains.UniRule annotation

Protein-protein interaction databases

STRINGi88036.ADH10411.

Structurei

3D structure databases

ProteinModelPortaliC7B2G2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini25 – 144120RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini154 – 462309RuBisCO_largeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiENOG410IIVP. Eukaryota.
COG1850. LUCA.
InParanoidiC7B2G2.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

C7B2G2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
TSPQTETKAS VGSKAGVKDH RLTHYTPDYQ TKDTDIPAAS RMTPQPGVPA
60 70 80 90 100
EEAGAAVAAE SSTGTWTTVW TDGLTNLDRY KGRCYDIEPV PGEKDQYIAY
110 120 130 140 150
AAHPSDLSEE GSVTNMSTSI VGNVFGSKAL RAPRSEDLRI PPAYSKTSKG
160 170 180 190 200
PPHGIQVERD KSNKYGRPSL GCTIKPKLGL SAKNYGRAVH ERLRGGLDFT
210 220 230 240 250
KDDENVNPQP FMRWRDRFVF VAEALYKAQS ETGEIKGHHL NATAGTCEEM
260 270 280 290 300
MKRAEFAREL GVPITMHDHS TGGFTANTSL AYYCRDNGLL PHIHRAMHAV
310 320 330 340 350
IDRQKNHGIH FRVLAKASRM SGGDHIHGGT VVGKLEGERQ VTLGFVDLLR
360 370 380 390 400
DDYIDKDRSR GIHPTQDWVS MPGVLPVASG GIHVWHMPAL TEIFGDDSVL
410 420 430 440 450
QFGGGTLGHP WGNAPGAVAN RVALEACVQA RNEGRDLAIE GNEVIREASK
460 470
WSPELAAACE VWKEIKFEFE TIDTI
Length:475
Mass (Da):51,961
Last modified:September 22, 2009 - v1
Checksum:i3CC536494E6846B1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ755183 Genomic DNA. Translation: ACT89000.1.
RefSeqiYP_003097495.1. NC_013086.1.

Genome annotation databases

GeneIDi8302288.
KEGGismo:SemoP_p024.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ755183 Genomic DNA. Translation: ACT89000.1.
RefSeqiYP_003097495.1. NC_013086.1.

3D structure databases

ProteinModelPortaliC7B2G2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi88036.ADH10411.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi8302288.
KEGGismo:SemoP_p024.

Phylogenomic databases

eggNOGiENOG410IIVP. Eukaryota.
COG1850. LUCA.
InParanoidiC7B2G2.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiC7B2G2_SELML
AccessioniPrimary (citable) accession number: C7B2G2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 7, 2016
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.