C6Y444 (C6Y444_PEDHD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 32.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: 6-phosphofructokinase HAMAP-Rule MF_00339 Short name=Phosphofructokinase HAMAP-Rule MF_00339 EC=2.7.1.11 HAMAP-Rule MF_00339 Alternative name(s): Phosphohexokinase HAMAP-Rule MF_00339 | ||||
| Gene names |
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| Organism | Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 485917 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter › ![]() |
Protein attributes
| Sequence length | 328 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate. HAMAP-Rule MF_00339 SAAS SAAS000023 |
| Pathway | Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4. HAMAP-Rule MF_00339 SAAS SAAS000023 |
| Subcellular location | Cytoplasm By similarity HAMAP-Rule MF_00339 SAAS SAAS000023. |
| Sequence similarities | Belongs to the phosphofructokinase family. HAMAP-Rule MF_00339 |
Ontologies
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 25 – 29 | 5 | ATP By similarity HAMAP-Rule MF_00339 | ||||||
| Nucleotide binding | 159 – 163 | 5 | ATP By similarity HAMAP-Rule MF_00339 | ||||||
| Nucleotide binding | 176 – 192 | 17 | ATP By similarity HAMAP-Rule MF_00339 | ||||||
Sites | |||||||||
| Active site | 132 | 1 | Proton acceptor By similarity HAMAP-Rule MF_00339 | ||||||
| Metal binding | 190 | 1 | Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_00339 | ||||||
| Metal binding | 192 | 1 | Magnesium By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 167 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 251 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 257 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
| Binding site | 260 | 1 | Substrate By similarity HAMAP-Rule MF_00339 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3)." Han C., Spring S., Lapidus A., Glavina del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A. Detter J.C.Stand. Genomic Sci. 1:54-62(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13125 / DSM 2366 / NCIB 9290. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001681 Genomic DNA. Translation: ACU05487.1. |
| RefSeq | YP_003093549.1. NC_013061.1. |
3D structure databases | |
| ProteinModelPortal | C6Y444. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 485917.Phep_3293. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ACU05487; ACU05487; Phep_3293. |
| GeneID | 8254412. |
| KEGG | phe:Phep_3293. |
| PATRIC | 22883743. VBIPedHep98714_3336. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0205. |
| HOGENOM | HOG000248870. |
| KO | K00850. |
| OMA | TANSHRR. |
Enzyme and pathway databases | |
| BioCyc | PHEP485917:GHL9-3328-MONOMER. |
| UniPathway | UPA00109; UER00182. |
Family and domain databases | |
| HAMAP | MF_00339. Phosphofructokinase. |
| InterPro | IPR012003. ATP_PFK_prok. IPR012828. PFKA_ATP. IPR022953. Phosphofructokinase. IPR015912. Phosphofructokinase_CS. IPR000023. Phosphofructokinase_dom. [Graphical view] |
| Pfam | PF00365. PFK. 1 hit. [Graphical view] |
| PIRSF | PIRSF000532. ATP_PFK_prok. 1 hit. |
| PRINTS | PR00476. PHFRCTKINASE. |
| SUPFAM | SSF53784. Ppfruckinase. 1 hit. |
| TIGRFAMs | TIGR02482. PFKA_ATP. 1 hit. |
| PROSITE | PS00433. PHOSPHOFRUCTOKINASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C6Y444_PEDHD | ||||||||
| Accession | Primary (citable) accession number: C6Y444 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
