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C6Y121

- C6Y121_PEDHD

UniProt

C6Y121 - C6Y121_PEDHD

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Protein
Submitted name: Ribulose-bisphosphate carboxylase
Gene
Phep_2747
Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-2772-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Phep_2747Imported
OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
Taxonomic identifieri485917 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
ProteomesiUP000000852: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485917.Phep_2747.

Structurei

3D structure databases

ProteinModelPortaliC6Y121.

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6Y121-1 [UniParc]FASTAAdd to Basket

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MERITAKYYI ETPLDLEKSA QLLAGEQSSG TFIAVPGETE ELKQRFAARV    50
ESITPMDTAN EPAIPGVLSA GGKYQRAMIE VSWSIENFGY NLPVMVSTLQ 100
GNLYELTQFT GLKLMDLELP ASFATAFKGP KFGIAGCRKL TGVYNRPLIG 150
TIIKPSIGMT PEQTAALVNT LALAGIDFIK DDELLGSSAN SPFDKRVDAI 200
MEVINRHADR SGKKVMYAFN ISDDIDQMQR NYEKILRSGG TSAMISLNSV 250
GLAGVKKIGE IGELAIHGHR NGWGMLNRHP LLGIEFPAYQ QLWRLAGVDQ 300
IHVNGIQNKF WESDDSVVRS IEACFKPLLG GYSVLPVVSS GQWGGQAVET 350
YRRVPSVDLL YMAGGGIMAH PDGPAGGVVA LQQAWQGAVD GLSVAETAAK 400
YPEFGHSVSV FGKKQA 416
Length:416
Mass (Da):44,985
Last modified:September 22, 2009 - v1
Checksum:iA020F12581DA133D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001681 Genomic DNA. Translation: ACU04948.1.
RefSeqiWP_015808559.1. NC_013061.1.
YP_003093010.1. NC_013061.1.

Genome annotation databases

EnsemblBacteriaiACU04948; ACU04948; Phep_2747.
GeneIDi8253855.
KEGGiphe:Phep_2747.
PATRICi22882599. VBIPedHep98714_2775.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001681 Genomic DNA. Translation: ACU04948.1 .
RefSeqi WP_015808559.1. NC_013061.1.
YP_003093010.1. NC_013061.1.

3D structure databases

ProteinModelPortali C6Y121.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 485917.Phep_2747.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU04948 ; ACU04948 ; Phep_2747 .
GeneIDi 8253855.
KEGGi phe:Phep_2747.
PATRICi 22882599. VBIPedHep98714_2775.

Phylogenomic databases

eggNOGi COG1850.
HOGENOMi HOG000230831.
KOi K01601.
OMAi MSIFKGV.
OrthoDBi EOG62K1SK.

Enzyme and pathway databases

BioCyci PHEP485917:GHL9-2772-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13125 / DSM 2366 / NCIB 9290.

Entry informationi

Entry nameiC6Y121_PEDHD
AccessioniPrimary (citable) accession number: C6Y121
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 3, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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