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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Phep_2747

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-2772-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Phep_2747Imported
OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
Taxonomic identifieri485917 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
ProteomesiUP000000852 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485917.Phep_2747.

Structurei

3D structure databases

ProteinModelPortaliC6Y121.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6Y121-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERITAKYYI ETPLDLEKSA QLLAGEQSSG TFIAVPGETE ELKQRFAARV
60 70 80 90 100
ESITPMDTAN EPAIPGVLSA GGKYQRAMIE VSWSIENFGY NLPVMVSTLQ
110 120 130 140 150
GNLYELTQFT GLKLMDLELP ASFATAFKGP KFGIAGCRKL TGVYNRPLIG
160 170 180 190 200
TIIKPSIGMT PEQTAALVNT LALAGIDFIK DDELLGSSAN SPFDKRVDAI
210 220 230 240 250
MEVINRHADR SGKKVMYAFN ISDDIDQMQR NYEKILRSGG TSAMISLNSV
260 270 280 290 300
GLAGVKKIGE IGELAIHGHR NGWGMLNRHP LLGIEFPAYQ QLWRLAGVDQ
310 320 330 340 350
IHVNGIQNKF WESDDSVVRS IEACFKPLLG GYSVLPVVSS GQWGGQAVET
360 370 380 390 400
YRRVPSVDLL YMAGGGIMAH PDGPAGGVVA LQQAWQGAVD GLSVAETAAK
410
YPEFGHSVSV FGKKQA
Length:416
Mass (Da):44,985
Last modified:September 22, 2009 - v1
Checksum:iA020F12581DA133D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA. Translation: ACU04948.1.
RefSeqiWP_015808559.1. NZ_AQGK01000001.1.

Genome annotation databases

EnsemblBacteriaiACU04948; ACU04948; Phep_2747.
KEGGiphe:Phep_2747.
PATRICi22882599. VBIPedHep98714_2775.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA. Translation: ACU04948.1.
RefSeqiWP_015808559.1. NZ_AQGK01000001.1.

3D structure databases

ProteinModelPortaliC6Y121.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi485917.Phep_2747.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU04948; ACU04948; Phep_2747.
KEGGiphe:Phep_2747.
PATRICi22882599. VBIPedHep98714_2775.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiMSIFKGV.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-2772-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13125 / DSM 2366 / NCIB 9290Imported.

Entry informationi

Entry nameiC6Y121_PEDHD
AccessioniPrimary (citable) accession number: C6Y121
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: July 22, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.