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C6Y121

- C6Y121_PEDHD

UniProt

C6Y121 - C6Y121_PEDHD

Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

Phep_2747

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciPHEP485917:GHL9-2772-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylaseImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Phep_2747Imported
    OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
    Taxonomic identifieri485917 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
    ProteomesiUP000000852: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi485917.Phep_2747.

    Structurei

    3D structure databases

    ProteinModelPortaliC6Y121.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1850.
    HOGENOMiHOG000230831.
    KOiK01601.
    OMAiMSIFKGV.
    OrthoDBiEOG62K1SK.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6Y121-1 [UniParc]FASTAAdd to Basket

    « Hide

    MERITAKYYI ETPLDLEKSA QLLAGEQSSG TFIAVPGETE ELKQRFAARV    50
    ESITPMDTAN EPAIPGVLSA GGKYQRAMIE VSWSIENFGY NLPVMVSTLQ 100
    GNLYELTQFT GLKLMDLELP ASFATAFKGP KFGIAGCRKL TGVYNRPLIG 150
    TIIKPSIGMT PEQTAALVNT LALAGIDFIK DDELLGSSAN SPFDKRVDAI 200
    MEVINRHADR SGKKVMYAFN ISDDIDQMQR NYEKILRSGG TSAMISLNSV 250
    GLAGVKKIGE IGELAIHGHR NGWGMLNRHP LLGIEFPAYQ QLWRLAGVDQ 300
    IHVNGIQNKF WESDDSVVRS IEACFKPLLG GYSVLPVVSS GQWGGQAVET 350
    YRRVPSVDLL YMAGGGIMAH PDGPAGGVVA LQQAWQGAVD GLSVAETAAK 400
    YPEFGHSVSV FGKKQA 416
    Length:416
    Mass (Da):44,985
    Last modified:September 22, 2009 - v1
    Checksum:iA020F12581DA133D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001681 Genomic DNA. Translation: ACU04948.1.
    RefSeqiWP_015808559.1. NC_013061.1.
    YP_003093010.1. NC_013061.1.

    Genome annotation databases

    EnsemblBacteriaiACU04948; ACU04948; Phep_2747.
    GeneIDi8253855.
    KEGGiphe:Phep_2747.
    PATRICi22882599. VBIPedHep98714_2775.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001681 Genomic DNA. Translation: ACU04948.1 .
    RefSeqi WP_015808559.1. NC_013061.1.
    YP_003093010.1. NC_013061.1.

    3D structure databases

    ProteinModelPortali C6Y121.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 485917.Phep_2747.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU04948 ; ACU04948 ; Phep_2747 .
    GeneIDi 8253855.
    KEGGi phe:Phep_2747.
    PATRICi 22882599. VBIPedHep98714_2775.

    Phylogenomic databases

    eggNOGi COG1850.
    HOGENOMi HOG000230831.
    KOi K01601.
    OMAi MSIFKGV.
    OrthoDBi EOG62K1SK.

    Enzyme and pathway databases

    BioCyci PHEP485917:GHL9-2772-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13125 / DSM 2366 / NCIB 9290Imported.

    Entry informationi

    Entry nameiC6Y121_PEDHD
    AccessioniPrimary (citable) accession number: C6Y121
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3