C6Y103 (C6Y103_PEDHD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate kinase FGGY EMBL ACU04930.1

Gene names

Ordered Locus Names:

Phep_2729

Organism

Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) [Complete proteome] [HAMAP]

Taxonomic identifier

485917 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter

Protein attributes

Sequence length	557 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Kinase EMBL ACU04930.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	kinase activity Inferred from electronic annotation. Source: UniProtKB-KW phosphotransferase activity, alcohol group as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6Y103 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: F114DA899FB33B55	FASTA	557	60,457
	10 20 30 40 50 60 MSKDQYVIGV DYGSDSVRSV IIDAKNGAEL ASSVFYYPRW QKGLYCNPAK NMFRQHPLDY 70 80 90 100 110 120 IEGLEQSIKD CIQKAGGTSI AGAIKAIAVD TTGSSPVAVN AAGQPLALLP EFEENPNAMF 130 140 150 160 170 180 VLWKDHTSVK EAMQLNKHAA KYETNYLKYC GGIYSSEWFW AKLLHILRAD EAVKGACYSW 190 200 210 220 230 240 VEHCDWVPFL LTGGTEVSAM KRSRCAAGHK ALWAEEFGGL PPNGFFTELD PLLNGFTDRL 250 260 270 280 290 300 YKETYTSDES AGTISAEWAA RLGLNADVVI GVGAFDAHMG AVGGEIEPYH LSKVMGTSTC 310 320 330 340 350 360 DILAVPVADI EGKLIKGICG QVNGSVIPGM LGLEAGQSAF GDTYAWFKEL LSWPVKNLLR 370 380 390 400 410 420 QSSIIDAATA AALEQELLDK LIPELSKQAA LLPKNDDDEL AVDWLNGRRT PDANQELKGA 430 440 450 460 470 480 IANLDLGSDA PRVFRALVEA TCFGAKNIVD RFIEEGIPVK GIIGIGGVAK KSPFVMQTMA 490 500 510 520 530 540 NVLNMPIRIH QFEHTCALGA AMFAAVVAGL YPTVETAMKG MGSGFDKEYI PEQENVAYYE 550 ARFLNYKALG GFIEENS

References

[1]

"Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3)." Han C., Spring S., Lapidus A., Glavina del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A. , Palaniappan K., Land M., Hauser L., Chang Y.-J., Jeffries C.C., Saunders E., Chertkov O., Brettin T., Goeker M., Rohde M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H.-P., Detter J.C. Stand. Genomic Sci. 1:54-62(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13125 / DSM 2366 / NCIB 9290.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001681 Genomic DNA. Translation: ACU04930.1.
RefSeq	YP_003092992.1. NC_013061.1.
3D structure databases
ProteinModelPortal	C6Y103.
ModBase	Search...
Protein-protein interaction databases
STRING	C6Y103.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8253837.
GenomeReviews	Gene locus Phep_2729 in contig CP001681_GR.
KEGG	phe:Phep_2729.
PATRIC	22882561. VBIPedHep98714_2756.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	NGRRTPD.
ProtClustDB	PRK04123.
Family and domain databases
InterPro	IPR000577. Carb_kinase_FGGY. IPR018485. Carb_kinase_FGGY_C. IPR018484. Carb_kinase_FGGY_N. [Graphical view]
KO	K00853.
PANTHER	PTHR10196. FGGY_kin. 1 hit.
Pfam	PF02782. FGGY_C. 1 hit. PF00370. FGGY_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6Y103_PEDHD

Accession

Primary (citable) accession number: C6Y103

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)