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C6Y054 (C6Y054_PEDHD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length535 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C6Y054 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 57A7BAEC8DF1833A

FASTA53561,116
        10         20         30         40         50         60 
MKRFTKLIQQ LEMSNKTNDK IAALVDYFNE ADELDKPYVI AMFTGKRPKR PVSTALIRQW 

        70         80         90        100        110        120 
ATALSGIPEW LFSECYHNVG DLSETIALVL PPASELSTRK LHEWINELAL LNGKDDDDKK 

       130        140        150        160        170        180 
TFILKAWDSL ETQERFIFNK LISGNFRIGV SGKMLVNALA RQTGTESSKI MHSIMGKWEP 

       190        200        210        220        230        240 
SQISYQDLMA GAHVNTDSSW PYPFCLAYAL EAEPGALGEP LEWQAEWKWD GIRGQIVKRN 

       250        260        270        280        290        300 
GELFIWSRGE ELVTEQFPEL HFLKDELEDG TVLDGEILSV KDGKVQAFSL LQQRLNRKTI 

       310        320        330        340        350        360 
SKAQLSDAPI GFFTYDLLEH KGRDLRSDAL SLRRELLTKT IEDLLTKHVV LLSPVIEFKS 

       370        380        390        400        410        420 
WAQLAKLRTI SRDINREGIM LKKMDSLYHS GRKRGDWWKW KINPYTVDTV MIYAQKGSGR 

       430        440        450        460        470        480 
RASFFTDYTF AVRDGEKLVT VAKAYSGLTD KEIKEVNAFV VKNAIEKFGP VRTVRPELVF 

       490        500        510        520        530 
EIAFEGIAES KRHKAGLALR FPRIARWRKD KKADEINTLD DLKQLLQATL LPAKA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001681 Genomic DNA. Translation: ACU04766.1.
RefSeqYP_003092828.1. NC_013061.1.

3D structure databases

ProteinModelPortalC6Y054.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING485917.Phep_2562.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU04766; ACU04766; Phep_2562.
GeneID8253669.
KEGGphe:Phep_2562.
PATRIC22882213. VBIPedHep98714_2583.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000036007.
KOK01971.
OMANRHKSGV.
OrthoDBEOG6Q8HXT.

Enzyme and pathway databases

BioCycPHEP485917:GHL9-2586-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6Y054_PEDHD
AccessionPrimary (citable) accession number: C6Y054
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)