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C6XY00

- C6XY00_PEDHD

UniProt

C6XY00 - C6XY00_PEDHD

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Protein
Submitted name: Glycosyl hydrolase BNR repeat-containing protein
Gene
Phep_2214
Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-(2->3)-sialidase activity Source: UniProtKB-EC
  2. exo-alpha-(2->6)-sialidase activity Source: UniProtKB-EC
  3. exo-alpha-(2->8)-sialidase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-2237-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase BNR repeat-containing proteinImported (EC:3.2.1.18Imported)
Gene namesi
Ordered Locus Names:Phep_2214Imported
OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
Taxonomic identifieri485917 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
ProteomesiUP000000852: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485917.Phep_2214.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4409.
HOGENOMiHOG000252336.
KOiK01186.
OMAiWGGLPEK.
OrthoDBiEOG67DPK3.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

C6XY00-1 [UniParc]FASTAAdd to Basket

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MKAIKRILNI SILCCLLPVI TVAQASQATQ KKYKIPVLKG RANNPVLRIK    50
IELNEAAELQ QIDILTKGTL RLNDIQDVKL LASGTDSALF KAEKAGMLRL 100
FAAANAPLKE KTSLTGNLPL QKGINYLWLT LSLKATANAA SFLNINATLV 150
RLNKDSLKIT PDNYANRLGI ALRQHNQDQV HTYRIPGLAT ANDGTLLGIY 200
DVRRDSGRDL QGNIDIGLSR SLDKGKTWQP MQIVMDMGTW GNLPEKFNGV 250
SDANILVDKK TGHIFIAGLW MYGVINEQGK WLEGLTEQSK DWNHQWKTKG 300
SQPGFEPKQT AQFLIVKSTD HGKTWSKPVN LTKMCKQEDW WLWAPAPGQG 350
ITMKNGTLVF PTQGRNASGK AFSNLTYSSD GGHTWKTSRA ATQESTTENM 400
VVELTDGTLM LNMRSNANSK DTSSTNGRAI AITNNMGQDW TLHPTSHQAL 450
PEPTCMASII RHDFVQNGKK RSVLLFSNPD AKTARKNMTI KVSYDDGKTW 500
SSDKKILLDE EKSRGYSCLT SIDNNTIGIL YEGSQADMVF QTIKLDELL 549
Length:549
Mass (Da):60,836
Last modified:September 22, 2009 - v1
Checksum:i43CD96DBBF5E11F6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001681 Genomic DNA. Translation: ACU04418.1.
RefSeqiWP_015808031.1. NC_013061.1.
YP_003092480.1. NC_013061.1.

Genome annotation databases

EnsemblBacteriaiACU04418; ACU04418; Phep_2214.
GeneIDi8253320.
KEGGiphe:Phep_2214.
PATRICi22881507. VBIPedHep98714_2231.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001681 Genomic DNA. Translation: ACU04418.1 .
RefSeqi WP_015808031.1. NC_013061.1.
YP_003092480.1. NC_013061.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 485917.Phep_2214.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU04418 ; ACU04418 ; Phep_2214 .
GeneIDi 8253320.
KEGGi phe:Phep_2214.
PATRICi 22881507. VBIPedHep98714_2231.

Phylogenomic databases

eggNOGi COG4409.
HOGENOMi HOG000252336.
KOi K01186.
OMAi WGGLPEK.
OrthoDBi EOG67DPK3.

Enzyme and pathway databases

BioCyci PHEP485917:GHL9-2237-MONOMER.

Family and domain databases

Gene3Di 2.120.10.10. 1 hit.
InterProi IPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
Pfami PF14873. BNR_assoc_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50939. SSF50939. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13125 / DSM 2366 / NCIB 9290.

Entry informationi

Entry nameiC6XY00_PEDHD
AccessioniPrimary (citable) accession number: C6XY00
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: September 3, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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