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Protein
Submitted name:

Glycosyl hydrolase BNR repeat-containing protein

Gene

Phep_2214

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-2215-MONOMER.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase BNR repeat-containing proteinImported (EC:3.2.1.18Imported)
Gene namesi
Ordered Locus Names:Phep_2214Imported
OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3)Imported
Taxonomic identifieri485917 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
Proteomesi
  • UP000000852 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_500297194126 – 549Sequence analysisAdd BLAST524

Interactioni

Protein-protein interaction databases

STRINGi485917.Phep_2214.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini27 – 155BNR_assoc_NInterPro annotationAdd BLAST129
Domaini211 – 525SialidasesInterPro annotationAdd BLAST315

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105W5A. Bacteria.
COG4409. LUCA.
HOGENOMiHOG000252336.
KOiK01186.
OMAiWLWAPAP.
OrthoDBiPOG091H0EBR.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 2 hits.
PfamiPF13088. BNR_2. 1 hit.
PF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

C6XY00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAIKRILNI SILCCLLPVI TVAQASQATQ KKYKIPVLKG RANNPVLRIK
60 70 80 90 100
IELNEAAELQ QIDILTKGTL RLNDIQDVKL LASGTDSALF KAEKAGMLRL
110 120 130 140 150
FAAANAPLKE KTSLTGNLPL QKGINYLWLT LSLKATANAA SFLNINATLV
160 170 180 190 200
RLNKDSLKIT PDNYANRLGI ALRQHNQDQV HTYRIPGLAT ANDGTLLGIY
210 220 230 240 250
DVRRDSGRDL QGNIDIGLSR SLDKGKTWQP MQIVMDMGTW GNLPEKFNGV
260 270 280 290 300
SDANILVDKK TGHIFIAGLW MYGVINEQGK WLEGLTEQSK DWNHQWKTKG
310 320 330 340 350
SQPGFEPKQT AQFLIVKSTD HGKTWSKPVN LTKMCKQEDW WLWAPAPGQG
360 370 380 390 400
ITMKNGTLVF PTQGRNASGK AFSNLTYSSD GGHTWKTSRA ATQESTTENM
410 420 430 440 450
VVELTDGTLM LNMRSNANSK DTSSTNGRAI AITNNMGQDW TLHPTSHQAL
460 470 480 490 500
PEPTCMASII RHDFVQNGKK RSVLLFSNPD AKTARKNMTI KVSYDDGKTW
510 520 530 540
SSDKKILLDE EKSRGYSCLT SIDNNTIGIL YEGSQADMVF QTIKLDELL
Length:549
Mass (Da):60,836
Last modified:September 22, 2009 - v1
Checksum:i43CD96DBBF5E11F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA. Translation: ACU04418.1.
RefSeqiWP_015808031.1. NZ_AQGK01000001.1.

Genome annotation databases

EnsemblBacteriaiACU04418; ACU04418; Phep_2214.
KEGGiphe:Phep_2214.
PATRICi22881507. VBIPedHep98714_2231.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA. Translation: ACU04418.1.
RefSeqiWP_015808031.1. NZ_AQGK01000001.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi485917.Phep_2214.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU04418; ACU04418; Phep_2214.
KEGGiphe:Phep_2214.
PATRICi22881507. VBIPedHep98714_2231.

Phylogenomic databases

eggNOGiENOG4105W5A. Bacteria.
COG4409. LUCA.
HOGENOMiHOG000252336.
KOiK01186.
OMAiWLWAPAP.
OrthoDBiPOG091H0EBR.

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-2215-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 2 hits.
PfamiPF13088. BNR_2. 1 hit.
PF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC6XY00_PEDHD
AccessioniPrimary (citable) accession number: C6XY00
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: November 2, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.