Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

C6XY00

- C6XY00_PEDHD

UniProt

C6XY00 - C6XY00_PEDHD

Protein
Submitted name:

Glycosyl hydrolase BNR repeat-containing protein

Gene

Phep_2214

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. exo-alpha-(2->3)-sialidase activity Source: UniProtKB-EC
    2. exo-alpha-(2->6)-sialidase activity Source: UniProtKB-EC
    3. exo-alpha-(2->8)-sialidase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciPHEP485917:GHL9-2237-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glycosyl hydrolase BNR repeat-containing proteinImported (EC:3.2.1.18Imported)
    Gene namesi
    Ordered Locus Names:Phep_2214Imported
    OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
    Taxonomic identifieri485917 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
    ProteomesiUP000000852: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi485917.Phep_2214.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG4409.
    HOGENOMiHOG000252336.
    KOiK01186.
    OMAiWGGLPEK.
    OrthoDBiEOG67DPK3.

    Family and domain databases

    Gene3Di2.120.10.10. 1 hit.
    InterProiIPR026856. Sialidase_fam.
    IPR029456. Sialidase_N.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    PfamiPF14873. BNR_assoc_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50939. SSF50939. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6XY00-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAIKRILNI SILCCLLPVI TVAQASQATQ KKYKIPVLKG RANNPVLRIK    50
    IELNEAAELQ QIDILTKGTL RLNDIQDVKL LASGTDSALF KAEKAGMLRL 100
    FAAANAPLKE KTSLTGNLPL QKGINYLWLT LSLKATANAA SFLNINATLV 150
    RLNKDSLKIT PDNYANRLGI ALRQHNQDQV HTYRIPGLAT ANDGTLLGIY 200
    DVRRDSGRDL QGNIDIGLSR SLDKGKTWQP MQIVMDMGTW GNLPEKFNGV 250
    SDANILVDKK TGHIFIAGLW MYGVINEQGK WLEGLTEQSK DWNHQWKTKG 300
    SQPGFEPKQT AQFLIVKSTD HGKTWSKPVN LTKMCKQEDW WLWAPAPGQG 350
    ITMKNGTLVF PTQGRNASGK AFSNLTYSSD GGHTWKTSRA ATQESTTENM 400
    VVELTDGTLM LNMRSNANSK DTSSTNGRAI AITNNMGQDW TLHPTSHQAL 450
    PEPTCMASII RHDFVQNGKK RSVLLFSNPD AKTARKNMTI KVSYDDGKTW 500
    SSDKKILLDE EKSRGYSCLT SIDNNTIGIL YEGSQADMVF QTIKLDELL 549
    Length:549
    Mass (Da):60,836
    Last modified:September 22, 2009 - v1
    Checksum:i43CD96DBBF5E11F6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001681 Genomic DNA. Translation: ACU04418.1.
    RefSeqiWP_015808031.1. NC_013061.1.
    YP_003092480.1. NC_013061.1.

    Genome annotation databases

    EnsemblBacteriaiACU04418; ACU04418; Phep_2214.
    GeneIDi8253320.
    KEGGiphe:Phep_2214.
    PATRICi22881507. VBIPedHep98714_2231.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001681 Genomic DNA. Translation: ACU04418.1 .
    RefSeqi WP_015808031.1. NC_013061.1.
    YP_003092480.1. NC_013061.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 485917.Phep_2214.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU04418 ; ACU04418 ; Phep_2214 .
    GeneIDi 8253320.
    KEGGi phe:Phep_2214.
    PATRICi 22881507. VBIPedHep98714_2231.

    Phylogenomic databases

    eggNOGi COG4409.
    HOGENOMi HOG000252336.
    KOi K01186.
    OMAi WGGLPEK.
    OrthoDBi EOG67DPK3.

    Enzyme and pathway databases

    BioCyci PHEP485917:GHL9-2237-MONOMER.

    Family and domain databases

    Gene3Di 2.120.10.10. 1 hit.
    InterProi IPR026856. Sialidase_fam.
    IPR029456. Sialidase_N.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    Pfami PF14873. BNR_assoc_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50939. SSF50939. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13125 / DSM 2366 / NCIB 9290Imported.

    Entry informationi

    Entry nameiC6XY00_PEDHD
    AccessioniPrimary (citable) accession number: C6XY00
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3