C6XX06 (C6XX06_PEDHD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Nicotinate phosphoribosyltransferase HAMAP MF_00570
Short name=NAPRTase HAMAP MF_00570
EC=2.4.2.11 HAMAP MF_00570

Gene names

Name:	pncB HAMAP MF_00570
Ordered Locus Names:	Phep_2095

Organism

Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) [Complete proteome] [HAMAP]

Taxonomic identifier

485917 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter

Protein attributes

Sequence length	389 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Nicotinate D-ribonucleotide + diphosphate = nicotinate + 5-phospho-alpha-D-ribose 1-diphosphate. HAMAP MF_00570 RuleBase RU003838 SAAS SAAS002638
Pathway	Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate D-ribonucleotide from nicotinate: step 1/1. HAMAP MF_00570 SAAS SAAS002638 Cofactor biosynthesis; NAD(+) biosynthesis; nicotinate ribonucleotide from nicotinate: step 1/1. RuleBase RU003838
Subcellular location	Cytoplasm By similarity HAMAP MF_00570.
Sequence similarities	Belongs to the NAPRTase family. HAMAP MF_00570 RuleBase RU003838

Ontologies

Keywords
Biological process	Pyridine nucleotide biosynthesis HAMAP MF_00570 RuleBase RU003838 SAAS SAAS007229
Cellular component	Cytoplasm HAMAP MF_00570
Molecular function	Glycosyltransferase SAAS SAAS002638 HAMAP MF_00570 RuleBase RU003838 EMBL ACU04300.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	NAD biosynthetic process Inferred from electronic annotation. Source: HAMAP nicotinate nucleotide biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nicotinate phosphoribosyltransferase activity Inferred from electronic annotation. Source: HAMAP nicotinate-nucleotide diphosphorylase (carboxylating) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6XX06 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: CE20930480C6FB6B	FASTA	389	44,442
	10 20 30 40 50 60 MALMISVLDN DFYKVTMQQG VVRLFPAAKA RYQFINRGKH SFPEGFAVAL RKAVDEMALL 70 80 90 100 110 120 KLSKAEKHFL QVNCPYLDPV YLDFLEGYRF NPEEVHIEQH EDQLQVKVEG FWYRTILWEV 130 140 150 160 170 180 PLMSLICELY YVLTGAKRIS NEAIIEVTRK KIEAYKALGV TIAEFGTRRR YAYDVQRLVL 190 200 210 220 230 240 QSLSQYGAGS FIGTSNMHLA MLHQTKPIGT HAHEWFMFHA ARYGFTMANA MGLEHWVQVY 250 260 270 280 290 300 RGDLGIALSD TYTTDVFFKQ FDRMYAKLFD GVRHDSADPL VFADKVISHY ERMGIDPKSK 310 320 330 340 350 360 TIIFSDGLDY EKVERIARHC LGRVGMSFGI GTNFTNDAGL PPMNIVIKMT EAHPQDGQWT 370 380 KVVKLSDEEG KYTGDIQTIN LAKTILGIS

References

[1]

"Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3)." Han C., Spring S., Lapidus A., Glavina del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A. , Palaniappan K., Land M., Hauser L., Chang Y.-J., Jeffries C.C., Saunders E., Chertkov O., Brettin T., Goeker M., Rohde M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H.-P., Detter J.C. Stand. Genomic Sci. 1:54-62(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13125 / DSM 2366 / NCIB 9290.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001681 Genomic DNA. Translation: ACU04300.1.
RefSeq	YP_003092362.1. NC_013061.1.
3D structure databases
ProteinModelPortal	C6XX06.
ModBase	Search...
Protein-protein interaction databases
STRING	C6XX06.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8253200.
GenomeReviews	Gene locus Phep_2095 in contig CP001681_GR.
KEGG	phe:Phep_2095.
PATRIC	22881277. VBIPedHep98714_2117.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	SFGWGTN.
ProtClustDB	PRK05321.
Family and domain databases
HAMAP	MF_00570. NAPRTase. [Tree]
InterPro	IPR006406. Nic_PRibTrfase. IPR015977. Nic_PRibTrfase-like. IPR007229. Nic_PRibTrfase-rel. IPR002638. Quinolinate_PRibosylTrfase_C. [Graphical view]
KO	K00763.
PANTHER	PTHR11098:SF1. NAPRTase. 1 hit.
Pfam	PF04095. NAPRTase. 1 hit. [Graphical view]
PIRSF	PIRSF000484. NAPRT. 1 hit.
SUPFAM	SSF51690. Q_phspho_trans. 1 hit.
TIGRFAMs	TIGR01514. NAPRTase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C6XX06_PEDHD

Accession

Primary (citable) accession number: C6XX06

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)