C6XU15 (C6XU15_PEDHD) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 18.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Ferrochelatase HAMAP MF_00323 EC=4.99.1.1 HAMAP MF_00323 | ||||
| Gene names |
| ||||
| Organism | Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 485917 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter |
Protein attributes
| Sequence length | 344 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the ferrous insertion into protoporphyrin IX By similarity. HAMAP MF_00323 |
| Catalytic activity | Protoheme + 2 H+ = protoporphyrin + Fe2+. HAMAP MF_00323 SAAS SAAS001015 |
| Pathway | Porphyrin metabolism; protoheme biosynthesis; protoheme from protoporphyrin-IX: step 1/1. HAMAP MF_00323 SAAS SAAS001015 |
| Subcellular location | Cytoplasm By similarity HAMAP MF_00323. |
| Sequence similarities | Belongs to the ferrochelatase family. HAMAP MF_00323 RuleBase RU004185 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Heme biosynthesis HAMAP MF_00323 SAAS SAAS001015 Porphyrin biosynthesis HAMAP MF_00323 SAAS SAAS001015 |
| Cellular component | Cytoplasm HAMAP MF_00323 |
| Ligand | Iron HAMAP MF_00323 SAAS SAAS001015 Metal-binding HAMAP MF_00323 |
| Molecular function | Lyase HAMAP MF_00323 SAAS SAAS001015 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | heme biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ferrochelatase activity Inferred from electronic annotation. Source: HAMAP metal ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Metal binding | 198 | 1 | Iron By similarity HAMAP MF_00323 | ||||||
| Metal binding | 301 | 1 | Iron By similarity HAMAP MF_00323 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3)." Han C., Spring S., Lapidus A., Glavina del Rio T., Tice H., Copeland A., Cheng J.-F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A. Detter J.C.Stand. Genomic Sci. 1:54-62(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 13125 / DSM 2366 / NCIB 9290. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001681 Genomic DNA. Translation: ACU05808.1. |
| RefSeq | YP_003093870.1. NC_013061.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C6XU15. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 8254748. |
| GenomeReviews | Gene locus Phep_3617 in contig CP001681_GR. |
| KEGG | phe:Phep_3617. |
| PATRIC | 22884451. VBIPedHep98714_3677. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | TIEEIGM. |
| ProtClustDB | PRK00035. |
Family and domain databases | |
| HAMAP | MF_00323. Ferrochelatase. [Tree] |
| InterPro | IPR001015. Ferrochelatase. [Graphical view] |
| KO | K01772. |
| PANTHER | PTHR11108. Ferrochelatase. 1 hit. |
| Pfam | PF00762. Ferrochelatase. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00109. HemH. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | C6XU15_PEDHD | ||||||||
| Accession | Primary (citable) accession number: C6XU15 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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