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C6XTH2 (C6XTH2_PEDHD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445
Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445
Gene names
Name:gcp HAMAP MF_01445
Ordered Locus Names:Phep_3559
OrganismPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) [Complete proteome] [HAMAP]
Taxonomic identifier485917 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Sphingobacteriaceae › Pedobacter

Protein attributes

Sequence length333 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445

Subcellular location

Cytoplasm By similarity HAMAP MF_01445 SAAS SAAS017860.

Sequence similarities

Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
   Biological processtRNA processing HAMAP MF_01445 SAAS SAAS017860
   Cellular componentCytoplasm HAMAP MF_01445 SAAS SAAS017860
   Molecular functionHydrolase
Protease EMBL ACU05750.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: UniProtKB-KW

threonylcarbamoyladenosine biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmetalloendopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C6XTH2 [UniParc].

Last modified September 22, 2009. Version 1.
Checksum: 7B9EE4445B17B8B7

FASTA33335,987
        10         20         30         40         50         60 
MSVILAIESS CDETSVAICN NGKITANVIA NQTIHENYGG VIPELASRVH QQNIVPVIQQ 

        70         80         90        100        110        120 
ALTDAKVSKK ELSAVAFTRG PGLLGSLLVG VSFAKSFALA LDLPLIAVNH MHAHILAHFI 

       130        140        150        160        170        180 
DDPKPAFPFL CLTVSGGHTQ IVLIRSYFDM EIVGETLDDA AGEAFDKTAK ILNLPYPGGP 

       190        200        210        220        230        240 
LIDKHAKEGN PLAFKFPEPQ IKDLNYSFSG LKTAILYFIR AQEKENPDFI AGNLNDICAS 

       250        260        270        280        290        300 
VQHSIVDILL NKLKKAAQQY GIKEIAIAGG VSANSGLRHA LQKMAGQQGW NVYIPAFQYC 

       310        320        330 
TDNAAMIAIA GYHKYLNGDF VGQDVAPLSR MEF

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001681 Genomic DNA. Translation: ACU05750.1.
RefSeqYP_003093812.1. NC_013061.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC6XTH2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8254680.
GenomeReviewsGene locus Phep_3559 in contig CP001681_GR.
KEGGphe:Phep_3559.
PATRIC22884307. VBIPedHep98714_3616.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAPAVGVHH.
ProtClustDBPRK09604.

Family and domain databases

HAMAPMF_01445. gcp.
[Tree]
InterProIPR022450. Pept_M22_O-sialoglycopept.
IPR000905. Peptidase_M22.
IPR017860. Peptidase_M22_CS.
IPR017861. Peptidase_M22_subgr.
[Graphical view]
KOK01409.
PfamPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSPR00789. OSIALOPTASE.
TIGRFAMsTIGR03723. Bact_gcp. 1 hit.
TIGR00329. Gcp_kae1. 1 hit.
PROSITEPS01016. GLYCOPROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC6XTH2_PEDHD
AccessionPrimary (citable) accession number: C6XTH2
Entry history
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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