Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Acetate/CoA ligase

Gene

Phep_3517

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-3555-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Acetate/CoA ligaseImported (EC:6.2.1.1Imported)
Gene namesi
Ordered Locus Names:Phep_3517Imported
OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
Taxonomic identifieri485917 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
ProteomesiUP000000852 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485917.Phep_3517.

Structurei

3D structure databases

ProteinModelPortaliC6XTD0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229981.
KOiK01895.
OMAiSHRCLTI.
OrthoDBiEOG68WR2H.

Family and domain databases

InterProiIPR011904. Ac_CoA_lig.
IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02188. Ac_CoA_lig_AcsA. 1 hit.
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6XTD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIKSFEEYQ KTYQYSVDYP EQFWEGIANN FQWRKKWNKV LSWNFSEPNI
60 70 80 90 100
KWFEGAKLNI TENCLDRHLA ENGDKPAIIW EPNDPQKESI TLSYKILHEQ
110 120 130 140 150
VCRFGNVLKK NGVKKGDRVC IYMPMVPELA VAVLACARIG AVHSVVFGGF
160 170 180 190 200
SAKSIADRIN DAECKVVITA DGAFRGNKQI QLKEVIDDAL IGCPTVERVI
210 220 230 240 250
VLTHTRMAVS MLKGRDVWWE DEIKLVDTNC PAEEMDAEDL LFILYTSGST
260 270 280 290 300
GKPKGVVHTI GGYMVYAGYT FSNVFNYQPD EVFFCTADIG WITGHSYIVY
310 320 330 340 350
GPLSQGATTL MFEGIPTFPD ASRMWQVVEK HKVNILYTAP TAIRSLMSFG
360 370 380 390 400
EEPLKGIDLS SLRVLGSVGE PINEEAWHWF DENIGKSKCP IVDTWWQTET
410 420 430 440 450
GGIMISPIAY VTPTKPSFAT LPLPGIQPML VDEQGKEIEG NGVNGNLCIK
460 470 480 490 500
FPWPGMLRTT YGDHERCKLT YFSTYKDLYF TGDGCLRDED GYYRITGRVD
510 520 530 540 550
DVINVSGHRI GTAEVENAIN MHAGVVESAV VGYPHDVKGQ GIYAFVINPN
560 570 580 590 600
VHNDEDLTRK DILQTVTRVI GAIAKPDKIL FVSGLPKTRS GKIMRRILRK
610 620 630
IAEGETSQIG DTSTLLDPAV VTEIIEKAGQ LK
Length:632
Mass (Da):70,713
Last modified:September 22, 2009 - v1
Checksum:i027EEF64F2E0A401
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA. Translation: ACU05708.1.
RefSeqiWP_015809317.1. NZ_AQGK01000001.1.
YP_003093770.1. NC_013061.1.

Genome annotation databases

EnsemblBacteriaiACU05708; ACU05708; Phep_3517.
KEGGiphe:Phep_3517.
PATRICi22884219. VBIPedHep98714_3572.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001681 Genomic DNA. Translation: ACU05708.1.
RefSeqiWP_015809317.1. NZ_AQGK01000001.1.
YP_003093770.1. NC_013061.1.

3D structure databases

ProteinModelPortaliC6XTD0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi485917.Phep_3517.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU05708; ACU05708; Phep_3517.
KEGGiphe:Phep_3517.
PATRICi22884219. VBIPedHep98714_3572.

Phylogenomic databases

eggNOGiCOG0365.
HOGENOMiHOG000229981.
KOiK01895.
OMAiSHRCLTI.
OrthoDBiEOG68WR2H.

Enzyme and pathway databases

BioCyciPHEP485917:GHL9-3555-MONOMER.

Family and domain databases

InterProiIPR011904. Ac_CoA_lig.
IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02188. Ac_CoA_lig_AcsA. 1 hit.
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13125 / DSM 2366 / NCIB 9290Imported.

Entry informationi

Entry nameiC6XTD0_PEDHD
AccessioniPrimary (citable) accession number: C6XTD0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: June 24, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.