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C6XSD4

- C6XSD4_PEDHD

UniProt

C6XSD4 - C6XSD4_PEDHD

Protein
Submitted name:

Alpha amylase catalytic region

Gene

Phep_1263

Organism
Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. glucan 1,4-alpha-maltohexaosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciPHEP485917:GHL9-1278-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported (EC:3.2.1.98Imported)
    Gene namesi
    Ordered Locus Names:Phep_1263Imported
    OrganismiPedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290)Imported
    Taxonomic identifieri485917 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesSphingobacteriaceaePedobacter
    ProteomesiUP000000852: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi485917.Phep_1263.

    Structurei

    3D structure databases

    ProteinModelPortaliC6XSD4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiRATKYGD.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C6XSD4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYIHYMDNQT LLQYFHWYYN ENEKLWVKAM KDAVTLAGAG ITGVWLPPAY    50
    KANSGGQSVG YDPYDLFDLG EFDQKNTLET RYGSKMEYQQ AIKAFQEHGI 100
    AVIADVVFNH KAGGDELEKI MVRTVDPDNR LEFTSDIFEI EAWTKFTFPG 150
    RNGQYSEFIW DKNCFSGIDW AENLKETGIY SIQNEYGEGW EEVPSTELGN 200
    YDYLMYNDIE FRNPAVRAEL KYWGEWYIKN CGMNGFRLDA VKHISTDFLT 250
    EWLDHIRDTF SRDFFIVAEN WNIEDPAALT HYLEITEGRM QLFDPMLHHN 300
    FYLASTTENY DLTRIFDHTL VQSHPEFAVT FVDNHDSQPL QALESYVDFW 350
    FRPLAYALIL LREQGIPCVF YPDLYGAKYT DKTEEGYDAG VELVALAALP 400
    DMLRIRKDLA YGEQHDYMDF PSCIGWTREG VPEKENSGIA VLMSNGDTGL 450
    KLMEIGKVHT GRVMVDALGI RAEEVLIDEN GCGEFYCDAG SVSIWVLSS 499
    Length:499
    Mass (Da):57,461
    Last modified:September 22, 2009 - v1
    Checksum:i7C74C41319A5C7F6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001681 Genomic DNA. Translation: ACU03479.1.
    RefSeqiYP_003091541.1. NC_013061.1.

    Genome annotation databases

    EnsemblBacteriaiACU03479; ACU03479; Phep_1263.
    GeneIDi8252361.
    KEGGiphe:Phep_1263.
    PATRICi22879601. VBIPedHep98714_1286.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001681 Genomic DNA. Translation: ACU03479.1 .
    RefSeqi YP_003091541.1. NC_013061.1.

    3D structure databases

    ProteinModelPortali C6XSD4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 485917.Phep_1263.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU03479 ; ACU03479 ; Phep_1263 .
    GeneIDi 8252361.
    KEGGi phe:Phep_1263.
    PATRICi 22879601. VBIPedHep98714_1286.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi RATKYGD.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci PHEP485917:GHL9-1278-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 13125 / DSM 2366 / NCIB 9290Imported.

    Entry informationi

    Entry nameiC6XSD4_PEDHD
    AccessioniPrimary (citable) accession number: C6XSD4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3