C6XKD4 (C6XKD4_HIRBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine--tRNA ligase EMBL ACT57732.1
EC=6.1.1.6 EMBL ACT57732.1

Gene names

Ordered Locus Names:

Hbal_0030

Organism

Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) [Complete proteome] [HAMAP]

Taxonomic identifier

582402 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Hirschia

Protein attributes

Sequence length	343 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lysyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW lysine-tRNA ligase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6XKD4 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: 7F4AAD2171FA9D44	FASTA	343	38,782
	10 20 30 40 50 60 MSDTPWWDAK RHADRRPFLL ARNKVRSALR NWFENEEFLE VECGALQISP GNETHLHAFS 70 80 90 100 110 120 SKFLDEDGST NQELFLHTSP EFSCKKLLAA GETKIVDFAR VYRNRESGPL HSPEFTMIEW 130 140 150 160 170 180 YRTGASLKDV MKDTANLARL ALNATQATQM MWKNSSCDPH KEPEFLTLTD AFSRYADIDL 190 200 210 220 230 240 NAVLEDTPAF KAAAAKAGVS VSDGAEWTDI FSAVLVSKIE DKLGIDRLTF LYNYPICEAA 250 260 270 280 290 300 LARPCRDDPR FAERFEMYAC GVELANGFGE LTDPIEQRKR FEADMILKLA YYGENYPLDE 310 320 330 340 ELLAALPHIP DASGVALGFD RLVMLCSNAR RIDDVLWTPF PSQ

References

[1]

"Genome sequences of eight morphologically diverse alphaproteobacteria." US DOE Joint Genome Institute Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V. J. Bacteriol. 193:4567-4568(2011) [PubMed: 21705585] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49814 / DSM 5838 / IFAM 1418.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001678 Genomic DNA. Translation: ACT57732.1.
RefSeq	YP_003058429.1. NC_012982.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C6XKD4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8185388.
GenomeReviews	Gene locus Hbal_0030 in contig CP001678_GR.
KEGG	hba:Hbal_0030.
PATRIC	22127968. VBIHirBal9878_0031.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	MPEASGI.
ProtClustDB	CLSK2532030.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004525. Lys-tRNA-synth-rel. IPR018149. Lys-tRNA-synth_II_C. [Graphical view]
KO	K04568.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF7. PTHR22594:SF7. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. [Graphical view]
PRINTS	PR00982. TRNASYNTHLYS.
TIGRFAMs	TIGR00462. GenX. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6XKD4_HIRBI

Accession

Primary (citable) accession number: C6XKD4

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)