C6XJK1 (C6XJK1_HIRBI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003887
EC=5.4.99.- RuleBase RU003887

Gene names

Ordered Locus Names:

Hbal_1608 EMBL ACT59296.1

Organism

Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) [Complete proteome] [HAMAP] EMBL ACT59296.1

Taxonomic identifier

582402 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Hyphomonadaceae › Hirschia › Hirschia baltica

Protein attributes

Sequence length	185 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rsuA family. RuleBase RU003887

Ontologies

Keywords
Molecular function	Isomerase SAAS SAAS000748 RuleBase RU003887
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C6XJK1 [UniParc]. Last modified September 22, 2009. Version 1. Checksum: F08217EAECF2F429	FASTA	185	21,084
	10 20 30 40 50 60 MSNILLFNKP FNVLSQFTDA GNEASSRRTL SHFIDVPNVY AAGRLDKDSE GLLVLTDDGK 70 80 90 100 110 120 LQHRISDPSN KMEKSYWVQV EGIPDETALD LLRAGVLLKD GMTKPAKVKL MDQPVDLWVR 130 140 150 160 170 180 EPPVRYRKSV PDSWIEITIS EGRNRQVRRM TACVGFPTLR LIRYRVGNWT IDGIESGDWI MHSKK

References

[1]

"Genome sequences of eight morphologically diverse alphaproteobacteria." US DOE Joint Genome Institute Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V. J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49814 / DSM 5838 / IFAM 1418.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001678 Genomic DNA. Translation: ACT59296.1.
RefSeq	YP_003059993.1. NC_012982.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	582402.Hbal_1608.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACT59296; ACT59296; Hbal_1608.
GeneID	8186940.
KEGG	hba:Hbal_1608.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1187.
HOGENOM	HOG000044955.
KO	K06181.
OMA	TWIELSI.
Enzyme and pathway databases
BioCyc	HBAL582402:GHMV-1697-MONOMER.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR000748. PsdUridine_synth_RsuA/RluB/E/F. IPR018496. PsdUridine_synth_RsuA/RluB_CS. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00093. TIGR00093. 1 hit.
PROSITE	PS01149. PSI_RSU. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C6XJK1_HIRBI

Accession

Primary (citable) accession number: C6XJK1

Entry history

Integrated into UniProtKB/TrEMBL:	September 22, 2009
Last sequence update:	September 22, 2009
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)