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C6XH78

- C6XH78_LIBAP

UniProt

C6XH78 - C6XH78_LIBAP

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Protein

Elongation factor Tu

Gene

CLIBASIA_00150

Organism
Liberibacter asiaticus (strain psy62)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-KW
  3. translation elongation factor activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciLASI537021:GHEM-148-MONOMER.
LASI537021:GHEM-30-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Gene namesi
Ordered Locus Names:CLIBASIA_00150Imported, CLIBASIA_00740Imported
OrganismiLiberibacter asiaticus (strain psy62)Imported
Taxonomic identifieri537021 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
ProteomesiUP000002744: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi537021.CLIBASIA_00740.

Structurei

3D structure databases

ProteinModelPortaliC6XH78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0050.
HOGENOMiHOG000229290.
KOiK02358.
OMAiDNIEMVG.
OrthoDBiEOG6R5C6X.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6XH78-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVEKRYVRNK ESLGLSTIGH VDHGKTTLTA AITKYYSEEK KEYGDIDSAP
60 70 80 90 100
EEKLRGITIA TAHVSYETDK RFYSHIDCPG HADYVKNMIT GATQADGAIL
110 120 130 140 150
VCAAEDGPKP QTREHILLAR QIGISSIVVY MNKVDAVDDD ELLDISEYEI
160 170 180 190 200
RDLLKEHKYS DDTPIIRGSA LCALQGTNKE LGEDSIHALM KAVDTHIPTP
210 220 230 240 250
QRSLDAPFLM HIEGSCGIEG RGTVVTGCIK RGRIKAGSDV EIIGMGGKKL
260 270 280 290 300
KVKCTDVEMF RKKLDEAIAG DNVGLLLRGV NRADVPRGRV VCAPGSIQEY
310 320 330 340 350
SRFRASVYIL TASEGGRTTG FMDNYRPQFF MDTADVTGRI ILSPGSQAVM
360 370 380 390
PGDRVDLEVE LIYPIAMEPN QTFSMREGGK TVGAGLILEI IE
Length:392
Mass (Da):42,942
Last modified:September 22, 2009 - v1
Checksum:i78F17D4BEA52DC51
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001677 Genomic DNA. Translation: ACT56623.1.
CP001677 Genomic DNA. Translation: ACT56736.1.
RefSeqiWP_012778370.1. NC_012985.3.
YP_003064563.1. NC_012985.3.
YP_003064676.1. NC_012985.3.

Genome annotation databases

EnsemblBacteriaiACT56623; ACT56623; CLIBASIA_00150.
ACT56736; ACT56736; CLIBASIA_00740.
GeneIDi8209126.
8209244.
KEGGilas:CLIBASIA_00150.
las:CLIBASIA_00740.
PATRICi31987070. VBICanLib64949_0031.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001677 Genomic DNA. Translation: ACT56623.1 .
CP001677 Genomic DNA. Translation: ACT56736.1 .
RefSeqi WP_012778370.1. NC_012985.3.
YP_003064563.1. NC_012985.3.
YP_003064676.1. NC_012985.3.

3D structure databases

ProteinModelPortali C6XH78.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 537021.CLIBASIA_00740.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACT56623 ; ACT56623 ; CLIBASIA_00150 .
ACT56736 ; ACT56736 ; CLIBASIA_00740 .
GeneIDi 8209126.
8209244.
KEGGi las:CLIBASIA_00150.
las:CLIBASIA_00740.
PATRICi 31987070. VBICanLib64949_0031.

Phylogenomic databases

eggNOGi COG0050.
HOGENOMi HOG000229290.
KOi K02358.
OMAi DNIEMVG.
OrthoDBi EOG6R5C6X.

Enzyme and pathway databases

BioCyci LASI537021:GHEM-148-MONOMER.
LASI537021:GHEM-30-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
    Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
    Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Psy62Imported.
  2. Duan Y.P., Zhou L.J., Hall D., Li W.B., Liu L., Gottwald T.R.
    Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Psy62Imported.
  3. "Diversity and plasticity of the intracellular plant pathogen and insect symbiont, 'Candidatus Liberibacter asiaticus', revealed by hyper variable prophage genes with intragenic tandem repeats."
    Zhou L., Powell C.A., Hoffman M.T., Li W., Fan G., Liu B., Lin H., Duan Y.
    Appl. Environ. Microbiol. 77:6663-6673(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: psy62Imported and Psy62Imported.

Entry informationi

Entry nameiC6XH78_LIBAP
AccessioniPrimary (citable) accession number: C6XH78
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: October 29, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3