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Protein

Elongation factor Tu

Gene

CLIBASIA_00150

Organism
Liberibacter asiaticus (strain psy62)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Elongation factorImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciLASI537021:GHEM-148-MONOMER.
LASI537021:GHEM-30-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Gene namesi
Ordered Locus Names:CLIBASIA_00150Imported, CLIBASIA_00740Imported
OrganismiLiberibacter asiaticus (strain psy62)Imported
Taxonomic identifieri537021 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
ProteomesiUP000002744 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi537021.CLIBASIA_00740.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0050.
HOGENOMiHOG000229290.
KOiK02358.
OMAiDEGGRHN.
OrthoDBiEOG6R5C6X.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR031157. G_TR_CS.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C6XH78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEKRYVRNK ESLGLSTIGH VDHGKTTLTA AITKYYSEEK KEYGDIDSAP
60 70 80 90 100
EEKLRGITIA TAHVSYETDK RFYSHIDCPG HADYVKNMIT GATQADGAIL
110 120 130 140 150
VCAAEDGPKP QTREHILLAR QIGISSIVVY MNKVDAVDDD ELLDISEYEI
160 170 180 190 200
RDLLKEHKYS DDTPIIRGSA LCALQGTNKE LGEDSIHALM KAVDTHIPTP
210 220 230 240 250
QRSLDAPFLM HIEGSCGIEG RGTVVTGCIK RGRIKAGSDV EIIGMGGKKL
260 270 280 290 300
KVKCTDVEMF RKKLDEAIAG DNVGLLLRGV NRADVPRGRV VCAPGSIQEY
310 320 330 340 350
SRFRASVYIL TASEGGRTTG FMDNYRPQFF MDTADVTGRI ILSPGSQAVM
360 370 380 390
PGDRVDLEVE LIYPIAMEPN QTFSMREGGK TVGAGLILEI IE
Length:392
Mass (Da):42,942
Last modified:September 22, 2009 - v1
Checksum:i78F17D4BEA52DC51
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001677 Genomic DNA. Translation: ACT56623.1.
CP001677 Genomic DNA. Translation: ACT56736.1.
RefSeqiWP_012778370.1. NC_012985.3.
YP_003064563.1. NC_012985.3.
YP_003064676.1. NC_012985.3.

Genome annotation databases

EnsemblBacteriaiACT56623; ACT56623; CLIBASIA_00150.
ACT56736; ACT56736; CLIBASIA_00740.
KEGGilas:CLIBASIA_00150.
las:CLIBASIA_00740.
PATRICi31987070. VBICanLib64949_0031.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001677 Genomic DNA. Translation: ACT56623.1.
CP001677 Genomic DNA. Translation: ACT56736.1.
RefSeqiWP_012778370.1. NC_012985.3.
YP_003064563.1. NC_012985.3.
YP_003064676.1. NC_012985.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi537021.CLIBASIA_00740.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACT56623; ACT56623; CLIBASIA_00150.
ACT56736; ACT56736; CLIBASIA_00740.
KEGGilas:CLIBASIA_00150.
las:CLIBASIA_00740.
PATRICi31987070. VBICanLib64949_0031.

Phylogenomic databases

eggNOGiCOG0050.
HOGENOMiHOG000229290.
KOiK02358.
OMAiDEGGRHN.
OrthoDBiEOG6R5C6X.

Enzyme and pathway databases

BioCyciLASI537021:GHEM-148-MONOMER.
LASI537021:GHEM-30-MONOMER.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR031157. G_TR_CS.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR000795. TF_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. G_TR_1. 1 hit.
PS51722. G_TR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
    Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
    Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: psy62 and Psy62Imported.
  2. Duan Y.P., Zhou L.J., Hall D., Li W.B., Liu L., Gottwald T.R.
    Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Psy62Imported.
  3. "Diversity and plasticity of the intracellular plant pathogen and insect symbiont, 'Candidatus Liberibacter asiaticus', revealed by hyper variable prophage genes with intragenic tandem repeats."
    Zhou L., Powell C.A., Hoffman M.T., Li W., Fan G., Liu B., Lin H., Duan Y.
    Appl. Environ. Microbiol. 77:6663-6673(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Psy62Imported and psy62Imported.

Entry informationi

Entry nameiC6XH78_LIBAP
AccessioniPrimary (citable) accession number: C6XH78
Entry historyi
Integrated into UniProtKB/TrEMBL: September 22, 2009
Last sequence update: September 22, 2009
Last modified: June 24, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.