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C6XH78

- C6XH78_LIBAP

UniProt

C6XH78 - C6XH78_LIBAP

Protein

Elongation factor Tu

Gene

CLIBASIA_00150

Organism
Liberibacter asiaticus (strain psy62)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (22 Sep 2009)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-KW
    3. translation elongation factor activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciLASI537021:GHEM-148-MONOMER.
    LASI537021:GHEM-30-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Gene namesi
    Ordered Locus Names:CLIBASIA_00150Imported, CLIBASIA_00740Imported
    OrganismiLiberibacter asiaticus (strain psy62)Imported
    Taxonomic identifieri537021 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeCandidatus Liberibacter
    ProteomesiUP000002744: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. intracellular Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi537021.CLIBASIA_00740.

    Structurei

    3D structure databases

    ProteinModelPortaliC6XH78.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0050.
    HOGENOMiHOG000229290.
    KOiK02358.
    OMAiDNIEMVG.
    OrthoDBiEOG6R5C6X.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C6XH78-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVEKRYVRNK ESLGLSTIGH VDHGKTTLTA AITKYYSEEK KEYGDIDSAP    50
    EEKLRGITIA TAHVSYETDK RFYSHIDCPG HADYVKNMIT GATQADGAIL 100
    VCAAEDGPKP QTREHILLAR QIGISSIVVY MNKVDAVDDD ELLDISEYEI 150
    RDLLKEHKYS DDTPIIRGSA LCALQGTNKE LGEDSIHALM KAVDTHIPTP 200
    QRSLDAPFLM HIEGSCGIEG RGTVVTGCIK RGRIKAGSDV EIIGMGGKKL 250
    KVKCTDVEMF RKKLDEAIAG DNVGLLLRGV NRADVPRGRV VCAPGSIQEY 300
    SRFRASVYIL TASEGGRTTG FMDNYRPQFF MDTADVTGRI ILSPGSQAVM 350
    PGDRVDLEVE LIYPIAMEPN QTFSMREGGK TVGAGLILEI IE 392
    Length:392
    Mass (Da):42,942
    Last modified:September 22, 2009 - v1
    Checksum:i78F17D4BEA52DC51
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001677 Genomic DNA. Translation: ACT56623.1.
    CP001677 Genomic DNA. Translation: ACT56736.1.
    RefSeqiWP_012778370.1. NC_012985.3.
    YP_003064563.1. NC_012985.3.
    YP_003064676.1. NC_012985.3.

    Genome annotation databases

    EnsemblBacteriaiACT56623; ACT56623; CLIBASIA_00150.
    ACT56736; ACT56736; CLIBASIA_00740.
    GeneIDi8209126.
    8209244.
    KEGGilas:CLIBASIA_00150.
    las:CLIBASIA_00740.
    PATRICi31987070. VBICanLib64949_0031.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001677 Genomic DNA. Translation: ACT56623.1 .
    CP001677 Genomic DNA. Translation: ACT56736.1 .
    RefSeqi WP_012778370.1. NC_012985.3.
    YP_003064563.1. NC_012985.3.
    YP_003064676.1. NC_012985.3.

    3D structure databases

    ProteinModelPortali C6XH78.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 537021.CLIBASIA_00740.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACT56623 ; ACT56623 ; CLIBASIA_00150 .
    ACT56736 ; ACT56736 ; CLIBASIA_00740 .
    GeneIDi 8209126.
    8209244.
    KEGGi las:CLIBASIA_00150.
    las:CLIBASIA_00740.
    PATRICi 31987070. VBICanLib64949_0031.

    Phylogenomic databases

    eggNOGi COG0050.
    HOGENOMi HOG000229290.
    KOi K02358.
    OMAi DNIEMVG.
    OrthoDBi EOG6R5C6X.

    Enzyme and pathway databases

    BioCyci LASI537021:GHEM-148-MONOMER.
    LASI537021:GHEM-30-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics."
      Duan Y., Zhou L., Hall D.G., Li W., Doddapaneni H., Lin H., Liu L., Vahling C.M., Gabriel D.W., Williams K.P., Dickerman A., Sun Y., Gottwald T.
      Mol. Plant Microbe Interact. 22:1011-1020(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Psy62Imported.
    2. Duan Y.P., Zhou L.J., Hall D., Li W.B., Liu L., Gottwald T.R.
      Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Psy62Imported.
    3. "Diversity and plasticity of the intracellular plant pathogen and insect symbiont, 'Candidatus Liberibacter asiaticus', revealed by hyper variable prophage genes with intragenic tandem repeats."
      Zhou L., Powell C.A., Hoffman M.T., Li W., Fan G., Liu B., Lin H., Duan Y.
      Appl. Environ. Microbiol. 77:6663-6673(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: psy62Imported and Psy62Imported.

    Entry informationi

    Entry nameiC6XH78_LIBAP
    AccessioniPrimary (citable) accession number: C6XH78
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 22, 2009
    Last sequence update: September 22, 2009
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3